RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 AACSQ86V21 672 aa28.44■■■□□ 2.14
MBD3-211ENST00000592965 RPAP2Q8IXW5 612 aaPredicted RBP28.44■■■□□ 2.14
MBD3-211ENST00000592965 DHX36Q9H2U1 1008 aaKnown RBP28.44■■■□□ 2.14
MBD3-211ENST00000592965 HERC5Q9UII4 1024 aaKnown RBP28.44■■■□□ 2.14
MBD3-211ENST00000592965 COG6Q9Y2V7 657 aa28.44■■■□□ 2.14
MBD3-211ENST00000592965 PTCH2Q9Y6C5 1203 aa28.44■■■□□ 2.14
MBD3-211ENST00000592965 SLC45A1Q9Y2W3 748 aa28.43■■■□□ 2.14
MBD3-211ENST00000592965 LOC285556D6RIA3 1793 aa28.42■■■□□ 2.14
MBD3-211ENST00000592965 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.42■■■□□ 2.14
MBD3-211ENST00000592965 PI4KBQ9UBF8 816 aa28.42■■■□□ 2.14
MBD3-211ENST00000592965 MGAMO43451 1857 aa28.42■■■□□ 2.14
MBD3-211ENST00000592965 FLT1P17948 1338 aa28.42■■■□□ 2.14
MBD3-211ENST00000592965 MKI67P46013 3256 aaKnown RBP28.41■■■□□ 2.14
MBD3-211ENST00000592965 HMMRO75330 724 aa28.41■■■□□ 2.14
MBD3-211ENST00000592965 PRMT2P55345 433 aa28.41■■■□□ 2.14
MBD3-211ENST00000592965 TMED8Q6PL24 325 aaPredicted RBP28.41■■■□□ 2.14
MBD3-211ENST00000592965 RHPN1Q8TCX5 695 aa28.41■■■□□ 2.14
MBD3-211ENST00000592965 ZNF333Q96JL9 665 aa28.41■■■□□ 2.14
MBD3-211ENST00000592965 CHMP4BQ9H444 224 aaKnown RBP28.41■■■□□ 2.14
MBD3-211ENST00000592965 TRIM75PA6NK02 468 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 IDH1O75874 414 aaKnown RBP28.4■■■□□ 2.14
MBD3-211ENST00000592965 BCRP11274 1271 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 SLC9C1Q4G0N8 1177 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 GADL1Q6ZQY3 521 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 SIRT2Q8IXJ6 389 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 TGFBRAP1Q8WUH2 860 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 TBC1D2Q9BYX2 928 aa28.4■■■□□ 2.14
MBD3-211ENST00000592965 MYH1P12882 1939 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 POTEFA5A3E0 1075 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 CYP2C8P10632 490 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 CYP7A1P22680 504 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 CAP2P40123 477 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 CCDC84Q86UT8 332 aaPredicted RBP28.39■■■□□ 2.14
MBD3-211ENST00000592965 METTL16Q86W50 562 aaKnown RBP28.39■■■□□ 2.14
MBD3-211ENST00000592965 CERS3Q8IU89 383 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 MAPKAPK5Q8IW41 473 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 IL1RAPL2Q9NP60 686 aa28.39■■■□□ 2.14
MBD3-211ENST00000592965 CTGFP29279 349 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 PSMC4P43686 418 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 RRP1BQ14684 758 aaKnown RBP28.38■■■□□ 2.13
MBD3-211ENST00000592965 NBPF11Q86T75 865 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 KIF1BPQ96EK5 621 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 TRIM47Q96LD4 638 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 NDUFB9Q9Y6M9 179 aa28.38■■■□□ 2.13
MBD3-211ENST00000592965 AGTPBP1Q9UPW5 1226 aa28.37■■■□□ 2.13
MBD3-211ENST00000592965 DYNLL1P63167 89 aaKnown RBP28.36■■■□□ 2.13
MBD3-211ENST00000592965 MAP3K12Q12852 859 aa28.36■■■□□ 2.13
MBD3-211ENST00000592965 CLASRPQ8N2M8 674 aaKnown RBP28.36■■■□□ 2.13
MBD3-211ENST00000592965 MAGEB6Q8N7X4 407 aa28.36■■■□□ 2.13
MBD3-211ENST00000592965 PROCA1Q8NCQ7 364 aaPredicted RBP28.36■■■□□ 2.13
MBD3-211ENST00000592965 ZNF280CQ8ND82 737 aa28.36■■■□□ 2.13
MBD3-211ENST00000592965 ANTXR1Q9H6X2 564 aa28.36■■■□□ 2.13
MBD3-211ENST00000592965 SRRDQ9UH36 339 aa28.36■■■□□ 2.13
MBD3-211ENST00000592965 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
MBD3-211ENST00000592965 FOXP4Q8IVH2 680 aaPredicted RBP28.35■■■□□ 2.13
MBD3-211ENST00000592965 DNAJC18Q9H819 358 aa28.35■■■□□ 2.13
MBD3-211ENST00000592965 USP17L5A8MUK1 530 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 RAB11FIP3O75154 756 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 HOXD10P28358 340 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 SPP2Q13103 211 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 MIGA1Q8NAN2 632 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 PALD1Q9ULE6 856 aa28.34■■■□□ 2.13
MBD3-211ENST00000592965 FMNL1O95466 1100 aaPredicted RBP28.33■■■□□ 2.13
MBD3-211ENST00000592965 OSBPP22059 807 aa28.33■■■□□ 2.13
MBD3-211ENST00000592965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.33■■■□□ 2.13
MBD3-211ENST00000592965 APBB1O00213 710 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 HLA-DOAP06340 250 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 ASNSP08243 561 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 FCGRTP55899 365 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 TTF1Q15361 905 aaPredicted RBP28.32■■■□□ 2.12
MBD3-211ENST00000592965 TREML2Q5T2D2 321 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 CRACR2BQ8N4Y2 399 aaPredicted RBP28.32■■■□□ 2.12
MBD3-211ENST00000592965 SMCR8Q8TEV9 937 aaPredicted RBP28.32■■■□□ 2.12
MBD3-211ENST00000592965 TMEM106CQ9BVX2 250 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 AS3MTQ9HBK9 375 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 GINM1Q9NU53 330 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 PNMA3Q9UL41 463 aa28.32■■■□□ 2.12
MBD3-211ENST00000592965 DDX60LQ5H9U9 1706 aaKnown RBP28.32■■■□□ 2.12
MBD3-211ENST00000592965 ECM2O94769 699 aaPredicted RBP28.31■■■□□ 2.12
MBD3-211ENST00000592965 IFIT2P09913 472 aaKnown RBP28.31■■■□□ 2.12
MBD3-211ENST00000592965 SH3TC2Q8TF17 1288 aa28.31■■■□□ 2.12
MBD3-211ENST00000592965 WDR18Q9BV38 432 aa28.31■■■□□ 2.12
MBD3-211ENST00000592965 TRIM34Q9BYJ4 488 aa28.31■■■□□ 2.12
MBD3-211ENST00000592965 SAP30BPQ9UHR5 308 aaKnown RBP28.31■■■□□ 2.12
MBD3-211ENST00000592965 MYPNQ86TC9 1320 aa28.31■■■□□ 2.12
MBD3-211ENST00000592965 HMGCS2P54868 508 aa28.3■■■□□ 2.12
MBD3-211ENST00000592965 SH3D19Q5HYK7 790 aa28.3■■■□□ 2.12
MBD3-211ENST00000592965 C20orf194Q5TEA3 1177 aa28.3■■■□□ 2.12
MBD3-211ENST00000592965 PRPF38BQ5VTL8 546 aaKnown RBP28.3■■■□□ 2.12
MBD3-211ENST00000592965 NAV1Q8NEY1 1877 aa28.29■■■□□ 2.12
MBD3-211ENST00000592965 USP5P45974 858 aa28.29■■■□□ 2.12
MBD3-211ENST00000592965 DOCK3Q8IZD9 2030 aa28.28■■■□□ 2.12
MBD3-211ENST00000592965 EN2P19622 333 aaPredicted RBP28.28■■■□□ 2.12
MBD3-211ENST00000592965 PABPC4Q13310 644 aaKnown RBP eCLIP28.28■■■□□ 2.125e-7■■■□□ 16.3
MBD3-211ENST00000592965 RAET1EQ8TD07 263 aa28.28■■■□□ 2.12
MBD3-211ENST00000592965 RIOK1Q9BRS2 568 aaKnown RBP28.28■■■□□ 2.12
MBD3-211ENST00000592965 PDE6AP16499 860 aa28.27■■■□□ 2.12
MBD3-211ENST00000592965 JAG1P78504 1218 aa28.27■■■□□ 2.12
MBD3-211ENST00000592965 EHD4Q9H223 541 aa28.27■■■□□ 2.12
MBD3-211ENST00000592965 ZBTB21Q9ULJ3 1066 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms