RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.92□□□□□ -0.5
TPM4-216ENST00000592822 FOXP4Q8IVH2 680 aaPredicted RBP11.92□□□□□ -0.5
TPM4-216ENST00000592822 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 CLMNQ96JQ2 1002 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 USP17L21D6R901 530 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 HLA-DOAP06340 250 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 INPP5BP32019 993 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 VGLL4Q14135 290 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
TPM4-216ENST00000592822 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 RGMBQ6NW40 437 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 IFNL3Q8IZI9 196 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
TPM4-216ENST00000592822 DDRGK1Q96HY6 314 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 EHD4Q9H223 541 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 IL25Q9H293 177 aa11.91□□□□□ -0.5
TPM4-216ENST00000592822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM4-216ENST00000592822 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
TPM4-216ENST00000592822 LAMB1P07942 1786 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 UNCXA6NJT0 531 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
TPM4-216ENST00000592822 APPP05067 770 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 VEGFBP49765 207 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
TPM4-216ENST00000592822 SBK1Q52WX2 424 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 RASAL3Q86YV0 1011 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 CRACR2BQ8N4Y2 399 aaPredicted RBP11.9□□□□□ -0.5
TPM4-216ENST00000592822 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
TPM4-216ENST00000592822 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
TPM4-216ENST00000592822 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 SLC10A3P09131 477 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 HSPD1P10809 573 aaKnown RBP11.89□□□□□ -0.51
TPM4-216ENST00000592822 TDO2P48775 406 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
TPM4-216ENST00000592822 GABPAQ06546 454 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 ALX1Q15699 326 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
TPM4-216ENST00000592822 SLC10A4Q96EP9 437 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 DYNLL2Q96FJ2 89 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 ELP3Q9H9T3 547 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
TPM4-216ENST00000592822 CSADQ9Y600 493 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 SNCAIPQ9Y6H5 919 aa11.89□□□□□ -0.51
TPM4-216ENST00000592822 RAD50Q92878 1312 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
TPM4-216ENST00000592822 MYH8P13535 1937 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
TPM4-216ENST00000592822 SHMT1P34896 483 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 CAP2P40123 477 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 JAG1P78504 1218 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 GRM1Q13255 1194 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 NOL9Q5SY16 702 aaKnown RBP11.88□□□□□ -0.51
TPM4-216ENST00000592822 TATDN1Q6P1N9 297 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 SCYL3Q8IZE3 742 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 NAPBQ9H115 298 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
TPM4-216ENST00000592822 THSD7BQ9C0I4 1608 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 SGSM2O43147 1006 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 AOC2O75106 756 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 CDC45O75419 566 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 FGAP02671 866 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 GJA5P36382 358 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 ECE1P42892 770 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
TPM4-216ENST00000592822 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 OPTNQ96CV9 577 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 WNK4Q96J92 1243 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 ZIC5Q96T25 663 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 ESYT1Q9BSJ8 1104 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 ROBO3Q96MS0 1386 aa11.87□□□□□ -0.51
TPM4-216ENST00000592822 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 CDK8P49336 464 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 PPARAQ07869 468 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
TPM4-216ENST00000592822 ERO1BQ86YB8 467 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms