RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 GRM8O00222 908 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 GPR37L1O60883 481 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 ZKSCAN1P17029 563 aaPredicted RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 PTPRAP18433 802 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 EPHB4P54760 987 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 CHAF1AQ13111 956 aaPredicted RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 IFIT5Q13325 482 aaKnown RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 CCL14Q16627 93 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 APOBEC3HQ6NTF7 200 aaKnown RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 SLC4A10Q6U841 1118 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 LMBR1LQ6UX01 489 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 SCYL3Q8IZE3 742 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
VAT1-209ENST00000592388 RPAP1Q9BWH6 1393 aaPredicted RBP9.32□□□□□ -0.92
VAT1-209ENST00000592388 TRIM43BA6NCK2 446 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 SMIM22K7EJ46 135 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 HIBADHP31937 336 aaKnown RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 TRIM60Q495X7 471 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 CCDC84Q86UT8 332 aaPredicted RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 FAM151AQ8WW52 585 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
VAT1-209ENST00000592388 TRIM43Q96BQ3 446 aaPredicted RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 KAZALD1Q96I82 304 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 SUCLG2Q96I99 432 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 ZDHHC15Q96MV8 337 aa9.31□□□□□ -0.92
VAT1-209ENST00000592388 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
VAT1-209ENST00000592388 PEX10O60683 326 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 XRCC5P13010 732 aaKnown RBP9.3□□□□□ -0.92
VAT1-209ENST00000592388 KCNA4P22459 653 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 ITGB8P26012 769 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 PBX2P40425 430 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 GCLCP48506 637 aaPredicted RBP9.3□□□□□ -0.92
VAT1-209ENST00000592388 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 SLC39A5Q6ZMH5 540 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 MICALL1Q8N3F8 863 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 FAM84BQ96KN1 310 aaPredicted RBP9.3□□□□□ -0.92
VAT1-209ENST00000592388 PUS3Q9BZE2 481 aaKnown RBP9.3□□□□□ -0.92
VAT1-209ENST00000592388 PDLIM7Q9NR12 457 aa9.3□□□□□ -0.92
VAT1-209ENST00000592388 MYH2Q9UKX2 1941 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 PLXNB2O15031 1838 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 PHF20L1A8MW92 1017 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 DNM1LO00429 736 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
VAT1-209ENST00000592388 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 CNGA1P29973 690 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 NHLH1Q02575 133 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 NFIAQ12857 509 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 SKIV2LQ15477 1246 aaKnown RBP9.29□□□□□ -0.92
VAT1-209ENST00000592388 CCDC57Q2TAC2 916 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 GJC2Q5T442 439 aaPredicted RBP9.29□□□□□ -0.92
VAT1-209ENST00000592388 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
VAT1-209ENST00000592388 SOCS4Q8WXH5 440 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 CNNM1Q9NRU3 951 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 C9orf78Q9NZ63 289 aaPredicted RBP9.29□□□□□ -0.92
VAT1-209ENST00000592388 DAGLAQ9Y4D2 1042 aa9.29□□□□□ -0.92
VAT1-209ENST00000592388 DOCK2Q92608 1830 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 GRXCR1A8MXD5 290 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 FRAT2O75474 233 aaPredicted RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 ALDH1L1O75891 902 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 AAK1Q2M2I8 961 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 ZFPM1Q8IX07 1006 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 LPAR1Q92633 364 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 UIMC1Q96RL1 719 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 PBX4Q9BYU1 374 aa9.28□□□□□ -0.92
VAT1-209ENST00000592388 BICC1Q9H694 974 aaKnown RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 DDX20Q9UHI6 824 aaKnown RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
VAT1-209ENST00000592388 RGS2P41220 211 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 CDC42EP5Q6NZY7 148 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 HHIPL2Q6UWX4 724 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 ANKRD44Q8N8A2 993 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 KLHDC4Q8TBB5 520 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 TBC1D22AQ8WUA7 517 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 MRIQ9BWK5 157 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 ASCC2Q9H1I8 757 aaPredicted RBP9.27□□□□□ -0.93
VAT1-209ENST00000592388 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 PTPRFP10586 1907 aa9.27□□□□□ -0.93
VAT1-209ENST00000592388 MYO5AQ9Y4I1 1855 aaKnown RBP9.26□□□□□ -0.93
VAT1-209ENST00000592388 RAG1P15918 1043 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 TLE2Q04725 743 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 FPGSQ05932 587 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 PABPC4Q13310 644 aaKnown RBP eCLIP9.26□□□□□ -0.931e-9■■■■□ 22.3
VAT1-209ENST00000592388 LRRC24Q50LG9 513 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 CCAR1Q8IX12 1150 aaKnown RBP9.26□□□□□ -0.93
VAT1-209ENST00000592388 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms