RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	RBM8A	Q9Y5S9	174 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	AK9	Q5TCS8	1911 aa		13.52	□□□□□ -0.24
CIRBP-236	ENST00000592051	MINDY4B	A8MYZ0	360 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	TBC1D12	O60347	775 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	CELF2	O95319	508 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	SHMT1	P34896	483 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	HAND2	P61296	217 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	CTDSPL2	Q05D32	466 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	PPARA	Q07869	468 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	PRKG1	Q13976	671 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	NECTIN1	Q15223	517 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	TBC1D10C	Q8IV04	446 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	ZNF112	Q9UJU3	913 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051		U3KPZ7	1027 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	ROBO3	Q96MS0	1386 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	CDK5RAP2	Q96SN8	1893 aa		13.52	□□□□□ -0.25
CIRBP-236	ENST00000592051	SIPA1L1	O43166	1804 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	FOCAD	Q5VW36	1801 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	CYP21A2	P08686	494 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	COL9A3	Q14050	684 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	TATDN1	Q6P1N9	297 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	KIAA1211	Q6ZU35	1233 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	C16orf86	Q6ZW13	317 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	STK11IP	Q8N1F8	1099 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	DDRGK1	Q96HY6	314 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	USP26	Q9BXU7	913 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	ZNF408	Q9H9D4	720 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	SERPINB13	Q9UIV8	391 aa		13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	POLR2A	P24928	1970 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-236	ENST00000592051	UBE2Q2L	H0YL09	131 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	HLA-DOA	P06340	250 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	FGR	P09769	529 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	INPP5B	P32019	993 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	CDK8	P49336	464 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	MAP3K11	Q16584	847 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	LDLRAD1	Q5T700	205 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	RASEF	Q8IZ41	740 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	KLRG1	Q96E93	195 aa		13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	1e-6	■■□□□ 11.4
CIRBP-236	ENST00000592051	HERC5	Q9UII4	1024 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-236	ENST00000592051	SLC27A2	O14975	620 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	PRDM1	O75626	825 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	RASA1	P20936	1047 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	CREB3L3	Q68CJ9	461 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	STOX1	Q6ZVD7	989 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	KCNB2	Q92953	911 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	ZNF341	Q9BYN7	854 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	GBA2	Q9HCG7	927 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	CTNNA3	Q9UI47	895 aa		13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	ANGEL1	Q9UNK9	670 aa	Known RBP	13.49	□□□□□ -0.25
CIRBP-236	ENST00000592051	NAV1	Q8NEY1	1877 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	REC8	O95072	547 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	HSPA4	P34932	840 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	DCAF15	Q66K64	600 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	HOOK2	Q96ED9	719 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	CLMN	Q96JQ2	1002 aa		13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-236	ENST00000592051	NEDD4	P46934	1319 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	ZNF213	O14771	459 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	ORC4	O43929	436 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	GDF11	O95390	407 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	AKR1B1	P15121	316 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	GUCY1A2	P33402	732 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	NF2	P35240	595 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	MAP3K9	P80192	1104 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	IMMT	Q16891	758 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	AKNAD1	Q5T1N1	836 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	STAG1	Q8WVM7	1258 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	WRNIP1	Q96S55	665 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	BACH2	Q9BYV9	841 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	SWAP70	Q9UH65	585 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	SNCAIP	Q9Y6H5	919 aa		13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-236	ENST00000592051	EPB41L2	O43491	1005 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	PPP1R12B	O60237	982 aa	Predicted RBP	13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	CAP2	P40123	477 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	FKBP1B	P68106	108 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	VGLL4	Q14135	290 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	NOL9	Q5SY16	702 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	SAPCD2	Q86UD0	394 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	CCDC84	Q86UT8	332 aa	Predicted RBP	13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	AMOTL1	Q8IY63	956 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	C2orf69	Q8N8R5	385 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	CNKSR2	Q8WXI2	1034 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	TAOK2	Q9UL54	1235 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	TLL2	Q9Y6L7	1015 aa		13.46	□□□□□ -0.25
CIRBP-236	ENST00000592051	MYH1	P12882	1939 aa		13.45	□□□□□ -0.26
CIRBP-236	ENST00000592051	TMEM88B	A6NKF7	163 aa		13.45	□□□□□ -0.26
CIRBP-236	ENST00000592051		E7EWF7	191 aa		13.45	□□□□□ -0.26
CIRBP-236	ENST00000592051	CTNND1	O60716	968 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-236	ENST00000592051	IREB2	P48200	963 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-236	ENST00000592051	APLP1	P51693	650 aa		13.45	□□□□□ -0.26

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