RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 MCM4P33991 863 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 CRKP46108 304 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 SCNN1DP51172 638 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
LINC01539-205ENST00000591974 MYH6P13533 1939 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 NID2Q14112 1375 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
LINC01539-205ENST00000591974 RCAN1P53805 252 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 CCT2P78371 535 aaKnown RBP12.37□□□□□ -0.43
LINC01539-205ENST00000591974 WTAPQ15007 396 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
LINC01539-205ENST00000591974 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
LINC01539-205ENST00000591974 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 VIL1P09327 827 aaKnown RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 TNKSO95271 1327 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 ZBTB43O43298 467 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 PRDM1O75626 825 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 EVX2Q03828 476 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 SEC23AQ15436 765 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 CDC42EP5Q6NZY7 148 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 ZSCAN10Q96SZ4 725 aaPredicted RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
LINC01539-205ENST00000591974 USP40Q9NVE5 1235 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 BCS1LQ9Y276 419 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
LINC01539-205ENST00000591974 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
LINC01539-205ENST00000591974 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 JAK2O60674 1132 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
LINC01539-205ENST00000591974 PTMSP20962 102 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 PLCD1P51178 756 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
LINC01539-205ENST00000591974 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
LINC01539-205ENST00000591974 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
LINC01539-205ENST00000591974 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 NFKBIEO00221 500 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 PSMD14O00487 310 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 CPLX1O14810 134 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 MICU3Q86XE3 530 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
LINC01539-205ENST00000591974 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 GMLQ99445 158 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 GOLGA8AA7E2F4 631 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 RAD17O75943 681 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 CDKL5O76039 1030 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 F13A1P00488 732 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 RBM5P52756 815 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01539-205ENST00000591974 PICALMQ13492 652 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 CPLX2Q6PUV4 134 aaKnown RBP12.34□□□□□ -0.43
LINC01539-205ENST00000591974 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 JDP2Q8WYK2 163 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
LINC01539-205ENST00000591974 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
LINC01539-205ENST00000591974 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 ATP6V1DQ9Y5K8 247 aa12.34□□□□□ -0.43
LINC01539-205ENST00000591974 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
LINC01539-205ENST00000591974 SLC4A8Q2Y0W8 1093 aa12.33□□□□□ -0.44
LINC01539-205ENST00000591974 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
LINC01539-205ENST00000591974 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
LINC01539-205ENST00000591974 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
LINC01539-205ENST00000591974 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
LINC01539-205ENST00000591974 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
LINC01539-205ENST00000591974 IDI2Q9BXS1 227 aa12.33□□□□□ -0.44
LINC01539-205ENST00000591974 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms