RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	ZNF112	Q9UJU3	913 aa		28.2	■■■□□ 2.1
LSM7-206	ENST00000591515	SUGT1	Q9Y2Z0	365 aa		28.2	■■■□□ 2.1
LSM7-206	ENST00000591515	MAST3	O60307	1309 aa		28.19	■■■□□ 2.1
LSM7-206	ENST00000591515	FCGRT	P55899	365 aa		28.19	■■■□□ 2.1
LSM7-206	ENST00000591515	ZNF512B	Q96KM6	892 aa	Predicted RBP	28.19	■■■□□ 2.1
LSM7-206	ENST00000591515	DBNL	Q9UJU6	430 aa	Known RBP	28.19	■■■□□ 2.1
LSM7-206	ENST00000591515	SGPL1	O95470	568 aa		28.18	■■■□□ 2.1
LSM7-206	ENST00000591515	ARID4A	P29374	1257 aa	Predicted RBP	28.18	■■■□□ 2.1
LSM7-206	ENST00000591515	HHIPL2	Q6UWX4	724 aa		28.18	■■■□□ 2.1
LSM7-206	ENST00000591515	PARK7	Q99497	189 aa	Known RBP	28.18	■■■□□ 2.1
LSM7-206	ENST00000591515	CYP2C8	P10632	490 aa		28.17	■■■□□ 2.1
LSM7-206	ENST00000591515	GPAT2	Q6NUI2	795 aa		28.17	■■■□□ 2.1
LSM7-206	ENST00000591515	FAM151A	Q8WW52	585 aa		28.17	■■■□□ 2.1
LSM7-206	ENST00000591515	GPATCH3	Q96I76	525 aa		28.17	■■■□□ 2.1
LSM7-206	ENST00000591515	BCL11A	Q9H165	835 aa		28.17	■■■□□ 2.1
LSM7-206	ENST00000591515	PHIP	Q8WWQ0	1821 aa		28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	EVI5	O60447	810 aa		28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	RASGRF1	Q13972	1273 aa		28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	NOL9	Q5SY16	702 aa	Known RBP	28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	SPTY2D1	Q68D10	685 aa	Predicted RBP	28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	SALL1	Q9NSC2	1324 aa		28.16	■■■□□ 2.1
LSM7-206	ENST00000591515	SPATA5	Q8NB90	893 aa		28.15	■■■□□ 2.1
LSM7-206	ENST00000591515	STAP2	Q9UGK3	403 aa		28.15	■■■□□ 2.1
LSM7-206	ENST00000591515	ADCY3	O60266	1144 aa		28.14	■■■□□ 2.1
LSM7-206	ENST00000591515	ELN	P15502	786 aa		28.14	■■■□□ 2.1
LSM7-206	ENST00000591515	INHA	P05111	366 aa		28.13	■■■□□ 2.09
LSM7-206	ENST00000591515	TCP10	Q12799	353 aa		28.13	■■■□□ 2.09
LSM7-206	ENST00000591515	TLR7	Q9NYK1	1049 aa	Known RBP	28.13	■■■□□ 2.09
LSM7-206	ENST00000591515	IGSF3	O75054	1194 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	LDHB	P07195	334 aa	Known RBP	28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	FLT3LG	P49771	235 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	NFIA	Q12857	509 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	ANKRD45	Q5TZF3	282 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	HMG20B	Q9P0W2	317 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	DOCK1	Q14185	1865 aa		28.12	■■■□□ 2.09
LSM7-206	ENST00000591515	CXCL11	O14625	94 aa		28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	SMARCA5	O60264	1052 aa	Predicted RBP	28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	SMC5	Q8IY18	1101 aa		28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	DEFB118	Q96PH6	123 aa		28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	DAGLA	Q9Y4D2	1042 aa		28.11	■■■□□ 2.09
LSM7-206	ENST00000591515	CDC42EP5	Q6NZY7	148 aa		28.1	■■■□□ 2.09
LSM7-206	ENST00000591515	SLF2	Q8IX21	1173 aa		28.1	■■■□□ 2.09
LSM7-206	ENST00000591515	ABCF2	Q9UG63	623 aa		28.1	■■■□□ 2.09
LSM7-206	ENST00000591515	MYH2	Q9UKX2	1941 aa		28.1	■■■□□ 2.09
LSM7-206	ENST00000591515	TFRC	P02786	760 aa	Known RBP	28.09	■■■□□ 2.09
LSM7-206	ENST00000591515	MCAM	P43121	646 aa		28.09	■■■□□ 2.09
LSM7-206	ENST00000591515	PXYLP1	Q8TE99	480 aa		28.09	■■■□□ 2.09
LSM7-206	ENST00000591515	PAK6	Q9NQU5	681 aa	Predicted RBP	28.09	■■■□□ 2.09
LSM7-206	ENST00000591515	FAM198A	Q9UFP1	575 aa		28.09	■■■□□ 2.09
LSM7-206	ENST00000591515	DIXDC1	Q155Q3	683 aa		28.08	■■■□□ 2.09
LSM7-206	ENST00000591515	ERICH6	Q7L0X2	663 aa		28.08	■■■□□ 2.09
LSM7-206	ENST00000591515	CRISPLD2	Q9H0B8	497 aa		28.08	■■■□□ 2.09
LSM7-206	ENST00000591515	ATRNL1	Q5VV63	1379 aa		28.08	■■■□□ 2.09
LSM7-206	ENST00000591515		A0A0G2JLL6	359 aa	Predicted RBP	28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	IGHD	P01880	384 aa		28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	MNX1	P50219	401 aa	Predicted RBP	28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	IRF5	Q13568	498 aa		28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	PRRT2	Q7Z6L0	340 aa	Predicted RBP	28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	DZIP1	Q86YF9	867 aa	Known RBP	28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	PAWR	Q96IZ0	340 aa	Known RBP	28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	ECHDC1	Q9NTX5	307 aa		28.07	■■■□□ 2.08
LSM7-206	ENST00000591515	ATP5J	P18859	108 aa		28.06	■■■□□ 2.08
LSM7-206	ENST00000591515	TTF1	Q15361	905 aa	Predicted RBP	28.06	■■■□□ 2.08
LSM7-206	ENST00000591515	DIS3L	Q8TF46	1054 aa	Known RBP	28.06	■■■□□ 2.08
LSM7-206	ENST00000591515	LRP2BP	Q9P2M1	347 aa		28.06	■■■□□ 2.08
LSM7-206	ENST00000591515	DDX60L	Q5H9U9	1706 aa	Known RBP	28.06	■■■□□ 2.08
LSM7-206	ENST00000591515	PHF20L1	A8MW92	1017 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	TNPO2	O14787	897 aa	Known RBP	28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	CAPN2	P17655	700 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	GSTO1	P78417	241 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	FASTKD5	Q7L8L6	764 aa	Known RBP	28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	ZFPM1	Q8IX07	1006 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	GDF15	Q99988	308 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	SNRK	Q9NRH2	765 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	ZHX2	Q9Y6X8	837 aa		28.05	■■■□□ 2.08
LSM7-206	ENST00000591515	TTC41P	Q6P2S7	1318 aa		28.04	■■■□□ 2.08
LSM7-206	ENST00000591515	ERC2	O15083	957 aa		28.04	■■■□□ 2.08
LSM7-206	ENST00000591515	ERICH6B	Q5W0A0	696 aa		28.04	■■■□□ 2.08
LSM7-206	ENST00000591515	GADL1	Q6ZQY3	521 aa		28.04	■■■□□ 2.08
LSM7-206	ENST00000591515	SCYL3	Q8IZE3	742 aa		28.04	■■■□□ 2.08
LSM7-206	ENST00000591515	LDHC	P07864	332 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	PRDX5	P30044	214 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	ZAP70	P43403	619 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	B4GALNT3	Q6L9W6	998 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	TMED8	Q6PL24	325 aa	Predicted RBP	28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	RAI14	Q9P0K7	980 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	SLC45A1	Q9Y2W3	748 aa		28.03	■■■□□ 2.08
LSM7-206	ENST00000591515	PTPRA	P18433	802 aa		28.02	■■■□□ 2.08
LSM7-206	ENST00000591515	BMP8B	P34820	402 aa		28.02	■■■□□ 2.08
LSM7-206	ENST00000591515	PI16	Q6UXB8	463 aa		28.02	■■■□□ 2.08
LSM7-206	ENST00000591515	AFG3L2	Q9Y4W6	797 aa		28.02	■■■□□ 2.08
LSM7-206	ENST00000591515	UNC80	Q8N2C7	3258 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	GPR153	Q6NV75	609 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	NECAB2	Q7Z6G3	386 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	CHD1L	Q86WJ1	897 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	C7orf61	Q8IZ16	206 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	PICK1	Q9NRD5	415 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	USP40	Q9NVE5	1235 aa		28.01	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms