RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PLEKHM2Q8IWE5 1019 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 HOOK2Q96ED9 719 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 SEC62Q99442 399 aaKnown RBP13.93□□□□□ -0.18
VMP1-211ENST00000591315 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
VMP1-211ENST00000591315 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 IGF2BP3O00425 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
VMP1-211ENST00000591315 ERC2O15083 957 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
VMP1-211ENST00000591315 TM4SF4P48230 202 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
VMP1-211ENST00000591315 MS4A4AQ96JQ5 239 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 PTPN18Q99952 460 aa13.92□□□□□ -0.18
VMP1-211ENST00000591315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.92□□□□□ -0.18
VMP1-211ENST00000591315 COL2A1P02458 1487 aaPredicted RBP13.92□□□□□ -0.18
VMP1-211ENST00000591315 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 CYP2D7A0A087X1C5 515 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 M0R2C6 588 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 IRF6O14896 467 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
VMP1-211ENST00000591315 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
VMP1-211ENST00000591315 PLCD1P51178 756 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 SKAP1Q86WV1 359 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 FSD1Q9BTV5 496 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 BEGAINQ9BUH8 593 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
VMP1-211ENST00000591315 PI4KBQ9UBF8 816 aa13.91□□□□□ -0.18
VMP1-211ENST00000591315 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.18
VMP1-211ENST00000591315 TBC1D12O60347 775 aa13.9□□□□□ -0.18
VMP1-211ENST00000591315 TBC1D8O95759 1140 aa13.9□□□□□ -0.18
VMP1-211ENST00000591315 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
VMP1-211ENST00000591315 SCYL3Q8IZE3 742 aa13.9□□□□□ -0.18
VMP1-211ENST00000591315 STRBPQ96SI9 672 aaKnown RBP13.9□□□□□ -0.18
VMP1-211ENST00000591315 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
VMP1-211ENST00000591315 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
VMP1-211ENST00000591315 GDF11O95390 407 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 PPIL2Q13356 520 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
VMP1-211ENST00000591315 METTL16Q86W50 562 aaKnown RBP13.89□□□□□ -0.19
VMP1-211ENST00000591315 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 APPBP2Q92624 585 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
VMP1-211ENST00000591315 MCM9Q9NXL9 1143 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 PHIPQ8WWQ0 1821 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 ATAD5Q96QE3 1844 aa13.89□□□□□ -0.19
VMP1-211ENST00000591315 LAMB1P07942 1786 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 CCL15-CCL14A0A0B4J2E2 113 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 TESPA1A2RU30 521 aaPredicted RBP13.88□□□□□ -0.19
VMP1-211ENST00000591315 CTNND1O60716 968 aaKnown RBP13.88□□□□□ -0.19
VMP1-211ENST00000591315 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
VMP1-211ENST00000591315 PTPRAP18433 802 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 CCL15Q16663 113 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 FOXP4Q8IVH2 680 aaPredicted RBP13.88□□□□□ -0.19
VMP1-211ENST00000591315 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
VMP1-211ENST00000591315 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 DYNLL2Q96FJ2 89 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
VMP1-211ENST00000591315 GPAA1O43292 621 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 SHMT1P34896 483 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 CAP2P40123 477 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 PPATQ06203 517 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 SREBF2Q12772 1141 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 DGKZQ13574 1117 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 MOGSQ13724 837 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 ZMYM1Q5SVZ6 1142 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 FAM43AQ8N2R8 423 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 PICK1Q9NRD5 415 aa13.87□□□□□ -0.19
VMP1-211ENST00000591315 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
VMP1-211ENST00000591315 PTPRFP10586 1907 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 BTBD19C9JJ37 291 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 USP17L21D6R901 530 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 GTF2A2P52657 109 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
VMP1-211ENST00000591315 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
VMP1-211ENST00000591315 SERPINB13Q9UIV8 391 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 KCNH4Q9UQ05 1017 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
VMP1-211ENST00000591315 A0A0D9SFI3 127 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 FOXP2O15409 715 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 CA12O43570 354 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
VMP1-211ENST00000591315 GABPAQ06546 454 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms