RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 CYP2D7A0A087X1C5 515 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 USP17L21D6R901 530 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 GRM1Q13255 1194 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 WRNIP1Q96S55 665 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 ESYT1Q9BSJ8 1104 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 ANO2Q9NQ90 1003 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
DDX39A-213ENST00000590315 SGSM2O43147 1006 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 SLURP2P0DP57 97 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
DDX39A-213ENST00000590315 HUNKP57058 714 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 CST9Q5W186 159 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 IL25Q9H293 177 aa15.34■□□□□ 0.05
DDX39A-213ENST00000590315 PLCD1P51178 756 aa15.33■□□□□ 0.04
DDX39A-213ENST00000590315 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
DDX39A-213ENST00000590315 SERPINB13Q9UIV8 391 aa15.33■□□□□ 0.04
DDX39A-213ENST00000590315 CSADQ9Y600 493 aa15.33■□□□□ 0.04
DDX39A-213ENST00000590315 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.04
DDX39A-213ENST00000590315 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-213ENST00000590315 SLC3A2P08195 630 aaKnown RBP15.32■□□□□ 0.04
DDX39A-213ENST00000590315 HAND2P61296 217 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 FKBP1BP68106 108 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 EVX2Q03828 476 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 DYNLL2Q96FJ2 89 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 TOMM22Q9NS69 142 aa15.32■□□□□ 0.04
DDX39A-213ENST00000590315 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
DDX39A-213ENST00000590315 HERC5Q9UII4 1024 aaKnown RBP15.32■□□□□ 0.04
DDX39A-213ENST00000590315 HSPA6P17066 643 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 HTRA3P83110 453 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 PPARAQ07869 468 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-213ENST00000590315 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 DSCC1Q9BVC3 393 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 TLL2Q9Y6L7 1015 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 PTPRFP10586 1907 aa15.31■□□□□ 0.04
DDX39A-213ENST00000590315 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
DDX39A-213ENST00000590315 FOXP2O15409 715 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 GDF11O95390 407 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 FGAP02671 866 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 INPP5BP32019 993 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 PTH1RQ03431 593 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 CTDSPL2Q05D32 466 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 SBK1Q52WX2 424 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 ANKRD13AQ8IZ07 590 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 ZKSCAN4Q969J2 545 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-213ENST00000590315 EHD4Q9H223 541 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 MKNK2Q9HBH9 465 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
DDX39A-213ENST00000590315 ZMYM6O95789 1325 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 ZNF213O14771 459 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 ZNF157P51786 506 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 PDE4BQ07343 736 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 VGLL4Q14135 290 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 ALX1Q15699 326 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 IMMTQ16891 758 aaKnown RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 KLRG1Q96E93 195 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 CLMNQ96JQ2 1002 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 DNAJC18Q9H819 358 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
DDX39A-213ENST00000590315 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-213ENST00000590315 ROBO3Q96MS0 1386 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 TBC1D12O60347 775 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 REC8O95072 547 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 CDK8P49336 464 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 DEFB115Q30KQ5 88 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 C16orf86Q6ZW13 317 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 SAPCD2Q86UD0 394 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 SLC10A4Q96EP9 437 aa15.28■□□□□ 0.04
DDX39A-213ENST00000590315 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
DDX39A-213ENST00000590315 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-213ENST00000590315 PRDM1O75626 825 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 SHMT1P34896 483 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 MAP3K11Q16584 847 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 RGMBQ6NW40 437 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 CABP5Q9NP86 173 aa15.27■□□□□ 0.04
DDX39A-213ENST00000590315 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-213ENST00000590315 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
DDX39A-213ENST00000590315 CAP2P40123 477 aa15.26■□□□□ 0.03
DDX39A-213ENST00000590315 RAB3GAP1Q15042 981 aa15.26■□□□□ 0.03
DDX39A-213ENST00000590315 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-213ENST00000590315 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-213ENST00000590315 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms