RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-208	ENST00000590301	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
NPC1-208	ENST00000590301	DBNL	Q9UJU6	430 aa	Known RBP	9.29	□□□□□ -0.92
NPC1-208	ENST00000590301	DDX19B	Q9UMR2	479 aa		9.29	□□□□□ -0.92
NPC1-208	ENST00000590301	AFG3L2	Q9Y4W6	797 aa		9.29	□□□□□ -0.92
NPC1-208	ENST00000590301	CASP8AP2	Q9UKL3	1982 aa		9.29	□□□□□ -0.92
NPC1-208	ENST00000590301	CYP2E1	P05181	493 aa	Predicted RBP	9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	SLC9C1	Q4G0N8	1177 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	PLCD3	Q8N3E9	789 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	PANK1	Q8TE04	598 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	SNRK	Q9NRH2	765 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	GINM1	Q9NU53	330 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	PI4KB	Q9UBF8	816 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	ADGRA2	Q96PE1	1338 aa		9.28	□□□□□ -0.92
NPC1-208	ENST00000590301	LAMB1	P07942	1786 aa		9.27	□□□□□ -0.92
NPC1-208	ENST00000590301	ZAP70	P43403	619 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	MAP3K12	Q12852	859 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	PRPF38B	Q5VTL8	546 aa	Known RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	GPAT2	Q6NUI2	795 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	METTL16	Q86W50	562 aa	Known RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	FOXP4	Q8IVH2	680 aa	Predicted RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	EAF2	Q96CJ1	260 aa	Predicted RBP	9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	ZNF333	Q96JL9	665 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	TMEM106C	Q9BVX2	250 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	PNMA3	Q9UL41	463 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	AGTPBP1	Q9UPW5	1226 aa		9.27	□□□□□ -0.93
NPC1-208	ENST00000590301	USP17L5	A8MUK1	530 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	RAB11FIP3	O75154	756 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	FMNL1	O95466	1100 aa	Predicted RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	HLA-DOA	P06340	250 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	BCR	P11274	1271 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	CYP7A1	P22680	504 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	CAP2	P40123	477 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	PSMC4	P43686	418 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	FCGRT	P55899	365 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	TTF1	Q15361	905 aa	Predicted RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	GADL1	Q6ZQY3	521 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	AACS	Q86V21	672 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	CLASRP	Q8N2M8	674 aa	Known RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	ZNF280C	Q8ND82	737 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	KIF1BP	Q96EK5	621 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	TRIM34	Q9BYJ4	488 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	CCDC8	Q9H0W5	538 aa	Predicted RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	AS3MT	Q9HBK9	375 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	PIH1D3	Q9NQM4	214 aa	Known RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	ZBTB40	Q9NUA8	1239 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	AATF	Q9NY61	560 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	TLR7	Q9NYK1	1049 aa	Known RBP	9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	SRRD	Q9UH36	339 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	CPA4	Q9UI42	421 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	RCAN3	Q9UKA8	241 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	EXOC6B	Q9Y2D4	811 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	PTCH2	Q9Y6C5	1203 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	HTT	P42858	3142 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	OTOF	Q9HC10	1997 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	FLT1	P17948	1338 aa		9.26	□□□□□ -0.93
NPC1-208	ENST00000590301	TRIM75P	A6NK02	468 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	IDH1	O75874	414 aa	Known RBP	9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	ASNS	P08243	561 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	CYP2C8	P10632	490 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	CAP1	Q01518	475 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	PDE3A	Q14432	1141 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	RHPN1	Q8TCX5	695 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	SMCR8	Q8TEV9	937 aa	Predicted RBP	9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	TRIM47	Q96LD4	638 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	WDR18	Q9BV38	432 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	ARHGAP39	Q9C0H5	1083 aa		9.25	□□□□□ -0.93
NPC1-208	ENST00000590301	IFIT2	P09913	472 aa	Known RBP	9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	CAPN2	P17655	700 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	OSBP	P22059	807 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	GCLC	P48506	637 aa	Predicted RBP	9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	SPP2	Q13103	211 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	SH3D19	Q5HYK7	790 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	ADGRA1	Q86SQ6	560 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	MAPKAPK5	Q8IW41	473 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	RAET1E	Q8TD07	263 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	TGFBRAP1	Q8WUH2	860 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	EHD4	Q9H223	541 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	COG6	Q9Y2V7	657 aa		9.24	□□□□□ -0.93
NPC1-208	ENST00000590301	TNRC18	O15417	2968 aa	Predicted RBP	9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	POTEF	A5A3E0	1075 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	FAM196B	A6NMK8	535 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	C19orf81	C9J6K1	198 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	GRK4	P32298	578 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	USP5	P45974	858 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	IRF5	Q13568	498 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	FAM110C	Q1W6H9	321 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	SLC4A8	Q2Y0W8	1093 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	TTC6	Q86TZ1	520 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	MAGEB6	Q8N7X4	407 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	SLAIN1	Q8ND83	568 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	NKX2-3	Q8TAU0	364 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	TMOD4	Q9NZQ9	345 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	PALD1	Q9ULE6	856 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	MYPN	Q86TC9	1320 aa		9.23	□□□□□ -0.93
NPC1-208	ENST00000590301	TNPO2	O14787	897 aa	Known RBP	9.22	□□□□□ -0.93

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