RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 MYH1P12882 1939 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 THSD7BQ9C0I4 1608 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 SIPA1L1O43166 1804 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 INPP5BP32019 993 aa22.51■■□□□ 1.19
MBD1-223ENST00000590215 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
MBD1-223ENST00000590215 ZKSCAN4Q969J2 545 aaPredicted RBP22.51■■□□□ 1.19
MBD1-223ENST00000590215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.51■■□□□ 1.19
MBD1-223ENST00000590215 CSADQ9Y600 493 aa22.51■■□□□ 1.19
MBD1-223ENST00000590215 SNCAIPQ9Y6H5 919 aa22.51■■□□□ 1.19
MBD1-223ENST00000590215 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 AOC2O75106 756 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 SPRYD7Q5W111 196 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 DNAJC18Q9H819 358 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 MCM9Q9NXL9 1143 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 TAOK2Q9UL54 1235 aa22.5■■□□□ 1.19
MBD1-223ENST00000590215 A0A0D9SFI3 127 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 HIP1O00291 1037 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 CTNND1O60716 968 aaKnown RBP22.49■■□□□ 1.19
MBD1-223ENST00000590215 ZBTB48P10074 688 aaPredicted RBP22.49■■□□□ 1.19
MBD1-223ENST00000590215 PLCD1P51178 756 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 WNK4Q96J92 1243 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 FAM227BQ96M60 508 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 ZIC5Q96T25 663 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 ELP3Q9H9T3 547 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
MBD1-223ENST00000590215 SPDYE5A6NIY4 337 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 FAM196BA6NMK8 535 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 PATL2C9JE40 543 aaKnown RBP22.48■■□□□ 1.19
MBD1-223ENST00000590215 POLR3DP05423 398 aaPredicted RBP22.48■■□□□ 1.19
MBD1-223ENST00000590215 GABPAQ06546 454 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 GRM1Q13255 1194 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 NMIQ13287 307 aaPredicted RBP22.48■■□□□ 1.19
MBD1-223ENST00000590215 MCMDC2Q4G0Z9 681 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 SERPINB13Q9UIV8 391 aa22.48■■□□□ 1.19
MBD1-223ENST00000590215 PCNTO95613 3336 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 GJA5P36382 358 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 SBK1Q52WX2 424 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 C12orf60Q5U649 245 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 SKAP1Q86WV1 359 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 ERO1BQ86YB8 467 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 SCYL3Q8IZE3 742 aa22.47■■□□□ 1.19
MBD1-223ENST00000590215 EPB41L4AQ9HCS5 686 aaPredicted RBP22.47■■□□□ 1.19
MBD1-223ENST00000590215 USP17L12C9JPN9 530 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 USP17L21D6R901 530 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 FOXP2O15409 715 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 KIF23Q02241 960 aaPredicted RBP22.46■■□□□ 1.19
MBD1-223ENST00000590215 RRP1BQ14684 758 aaKnown RBP22.46■■□□□ 1.19
MBD1-223ENST00000590215 TATDN1Q6P1N9 297 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 CTR9Q6PD62 1173 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 REM2Q8IYK8 340 aaPredicted RBP22.46■■□□□ 1.19
MBD1-223ENST00000590215 CRACR2BQ8N4Y2 399 aaPredicted RBP22.46■■□□□ 1.19
MBD1-223ENST00000590215 OPTNQ96CV9 577 aa22.46■■□□□ 1.19
MBD1-223ENST00000590215 CYP2D6P10635 497 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 CAP2P40123 477 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 SLC4A8Q2Y0W8 1093 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 CCDC129Q6ZRS4 1044 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 CNKSR2Q8WXI2 1034 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 DIAPH3Q9NSV4 1193 aa22.45■■□□□ 1.18
MBD1-223ENST00000590215 ARPP21Q9UBL0 812 aaPredicted RBP22.45■■□□□ 1.18
MBD1-223ENST00000590215 BAZ2AQ9UIF9 1905 aaKnown RBP22.45■■□□□ 1.18
MBD1-223ENST00000590215 EVX2Q03828 476 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 PPATQ06203 517 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 BMP2KLQ5H9B9 411 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 ZNF589Q86UQ0 364 aaPredicted RBP22.44■■□□□ 1.18
MBD1-223ENST00000590215 IFNL3Q8IZI9 196 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 TRIM34Q9BYJ4 488 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 GINM1Q9NU53 330 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 WBP1LQ9NX94 342 aa22.44■■□□□ 1.18
MBD1-223ENST00000590215 CCDC171Q6TFL3 1326 aa22.43■■□□□ 1.18
MBD1-223ENST00000590215 SHMT1P34896 483 aa22.43■■□□□ 1.18
MBD1-223ENST00000590215 MAP2K1Q02750 393 aaPredicted RBP22.43■■□□□ 1.18
MBD1-223ENST00000590215 PPIL2Q13356 520 aa22.43■■□□□ 1.18
MBD1-223ENST00000590215 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
MBD1-223ENST00000590215 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
MBD1-223ENST00000590215 CYP2D7A0A087X1C5 515 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 APPP05067 770 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 PTPRAP18433 802 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 TM4SF4P48230 202 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 ALX1Q15699 326 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
MBD1-223ENST00000590215 OTUD5Q96G74 571 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 MS4A4AQ96JQ5 239 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 PICK1Q9NRD5 415 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 SWAP70Q9UH65 585 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 LAMB1P07942 1786 aa22.42■■□□□ 1.18
MBD1-223ENST00000590215 TESPA1A2RU30 521 aaPredicted RBP22.41■■□□□ 1.18
MBD1-223ENST00000590215 MANSC4A6NHS7 340 aaPredicted RBP22.41■■□□□ 1.18
MBD1-223ENST00000590215 CHMLP26374 656 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 MFAP1P55081 439 aaKnown RBP22.41■■□□□ 1.18
MBD1-223ENST00000590215 INHBEP58166 350 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 MKRN3Q13064 507 aaKnown RBP22.41■■□□□ 1.18
MBD1-223ENST00000590215 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 C16orf86Q6ZW13 317 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 KCNH4Q9UQ05 1017 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 DOCK1Q14185 1865 aa22.41■■□□□ 1.18
MBD1-223ENST00000590215 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
MBD1-223ENST00000590215 SMIM22K7EJ46 135 aa22.4■■□□□ 1.18
MBD1-223ENST00000590215 IRF6O14896 467 aa22.4■■□□□ 1.18
MBD1-223ENST00000590215 HSPD1P10809 573 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms