RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 TBC1D12O60347 775 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 SLC10A3P09131 477 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 VEGFBP49765 207 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 VGLL4Q14135 290 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 MIGA2Q7L4E1 593 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 ZNF341Q9BYN7 854 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
HMGN1P31-201ENST00000590085 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 FOXP2O15409 715 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 NMIQ13287 307 aaPredicted RBP11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 ANKRD13AQ8IZ07 590 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 EHD4Q9H223 541 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 HERC5Q9UII4 1024 aaKnown RBP11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
HMGN1P31-201ENST00000590085 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 HLA-DOAP06340 250 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 GNAT2P19087 354 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 INPP5BP32019 993 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 ECE1P42892 770 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 PLCD1P51178 756 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 EVX2Q03828 476 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 GABPAQ06546 454 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 CCDC129Q6ZRS4 1044 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
HMGN1P31-201ENST00000590085 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 HIP1O00291 1037 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 CYP2D6P10635 497 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 GJA5P36382 358 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 NOGQ13253 232 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 RRP1BQ14684 758 aaKnown RBP11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 JMYQ8N9B5 988 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 CSADQ9Y600 493 aa11.2□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 RAD50Q92878 1312 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 SPDYE5A6NIY4 337 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 AOC2O75106 756 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 SBK1Q52WX2 424 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 C12orf60Q5U649 245 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 IL25Q9H293 177 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 RLFQ13129 1914 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 MGAMO43451 1857 aa11.19□□□□□ -0.62
HMGN1P31-201ENST00000590085 CYP2D7A0A087X1C5 515 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 USP17L21D6R901 530 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 CTNND1O60716 968 aaKnown RBP11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 POLR3DP05423 398 aaPredicted RBP11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 CHMLP26374 656 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 SHMT1P34896 483 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 MAP2K2P36507 400 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 GRM1Q13255 1194 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 TATDN1Q6P1N9 297 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 CWC27Q6UX04 472 aaKnown RBP11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 ERO1BQ86YB8 467 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 IFNL3Q8IZI9 196 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms