RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
SMAD4-210ENST00000590061 WASHC4Q2M389 1173 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 CCDC93Q567U6 631 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
SMAD4-210ENST00000590061 KIAA1211Q6ZU35 1233 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 WDR66Q8TBY9 1149 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 COA1Q9GZY4 146 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 CCDC8Q9H0W5 538 aaPredicted RBP8.83□□□□□ -1
SMAD4-210ENST00000590061 DIAPH3Q9NSV4 1193 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
SMAD4-210ENST00000590061 RAD50Q92878 1312 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 SPEF2Q9C093 1822 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 UFL1O94874 794 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 ALDH1A1P00352 501 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 CTHP32929 405 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 CCDC102BQ68D86 513 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 PODNQ7Z5L7 613 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 FBXO33Q7Z6M2 555 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 C16orf71Q8IYS4 520 aaPredicted RBP8.82□□□□□ -1
SMAD4-210ENST00000590061 PI4K2BQ8TCG2 481 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 RILPL2Q969X0 211 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 PSMD1Q99460 953 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 RTFDC1Q9BY42 306 aaPredicted RBP8.82□□□□□ -1
SMAD4-210ENST00000590061 PAG1Q9NWQ8 432 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 MED23Q9ULK4 1368 aa8.82□□□□□ -1
SMAD4-210ENST00000590061 CASZ1Q86V15 1759 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 SDSP20132 328 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 MCCP23508 829 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 GSTO1P78417 241 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 KBTBD3Q8NAB2 608 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 SPATA5Q8NB90 893 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 PROCA1Q8NCQ7 364 aaPredicted RBP8.81□□□□□ -1
SMAD4-210ENST00000590061 TBC1D16Q8TBP0 767 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 FSD1Q9BTV5 496 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 BCL11AQ9H165 835 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 TLL2Q9Y6L7 1015 aa8.81□□□□□ -1
SMAD4-210ENST00000590061 MAST3O60307 1309 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 KIF13BQ9NQT8 1826 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 TAF5LO75529 589 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
SMAD4-210ENST00000590061 LDHCP07864 332 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 CDK11BP21127 795 aaKnown RBP8.8□□□□□ -1
SMAD4-210ENST00000590061 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
SMAD4-210ENST00000590061 FKBP1AP62942 108 aaKnown RBP8.8□□□□□ -1
SMAD4-210ENST00000590061 FKBP4Q02790 459 aaKnown RBP eCLIP8.8□□□□□ -1
SMAD4-210ENST00000590061 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 HELBQ8NG08 1087 aaPredicted RBP8.8□□□□□ -1
SMAD4-210ENST00000590061 FOXJ1Q92949 421 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 BACH2Q9BYV9 841 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 BOLA2Q9H3K6 86 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 HELLSQ9NRZ9 838 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 SALL1Q9NSC2 1324 aa8.8□□□□□ -1
SMAD4-210ENST00000590061 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 IL1R1P14778 569 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 DPEP1P16444 411 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 GNAT2P19087 354 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 NT5C2P49902 561 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 GPSM2P81274 684 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 UBE3CQ15386 1083 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 C7orf43Q8WVR3 580 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 ZNF775Q96BV0 537 aaPredicted RBP8.79□□□□□ -1
SMAD4-210ENST00000590061 FAM84BQ96KN1 310 aaPredicted RBP8.79□□□□□ -1
SMAD4-210ENST00000590061 DNAJC2Q99543 621 aaKnown RBP8.79□□□□□ -1
SMAD4-210ENST00000590061 NOL10Q9BSC4 688 aaKnown RBP8.79□□□□□ -1
SMAD4-210ENST00000590061 LRP2BPQ9P2M1 347 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 GMPR2Q9P2T1 348 aaKnown RBP8.79□□□□□ -1
SMAD4-210ENST00000590061 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 MYO3BQ8WXR4 1341 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
SMAD4-210ENST00000590061 RPAP1Q9BWH6 1393 aaPredicted RBP8.78□□□□□ -1
SMAD4-210ENST00000590061 A0A0G2JLW4 131 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 GOLIM4O00461 696 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 RNF113AO15541 343 aaKnown RBP8.78□□□□□ -1
SMAD4-210ENST00000590061 RNF20Q5VTR2 975 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 TDRD7Q8NHU6 1098 aaKnown RBP8.78□□□□□ -1
SMAD4-210ENST00000590061 OTUD7AQ8TE49 926 aaPredicted RBP8.78□□□□□ -1
SMAD4-210ENST00000590061 JDP2Q8WYK2 163 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 TSC1Q92574 1164 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 MRIQ9BWK5 157 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 CTNNA3Q9UI47 895 aa8.78□□□□□ -1
SMAD4-210ENST00000590061 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1
SMAD4-210ENST00000590061 DLEC1Q9Y238 1755 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 BAG3O95817 575 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 GSPT1P15170 499 aaKnown RBP8.77□□□□□ -1.01
SMAD4-210ENST00000590061 CHMLP26374 656 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 CHRNA5P30532 468 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 PHKA1P46020 1223 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 MCMDC2Q4G0Z9 681 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 C1QTNF2Q9BXJ5 285 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 NACAP1Q9BZK3 213 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 PDGFDQ9GZP0 370 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-210ENST00000590061 TAOK3Q9H2K8 898 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 CD209Q9NNX6 404 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms