RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 PUM3Q15397 648 aaKnown RBP10□□□□□ -0.81
VAT1-207ENST00000589828 LHX8Q68G74 356 aa10□□□□□ -0.81
VAT1-207ENST00000589828 CDX2Q99626 313 aaPredicted RBP10□□□□□ -0.81
VAT1-207ENST00000589828 LRRFIP2Q9Y608 721 aaKnown RBP10□□□□□ -0.81
VAT1-207ENST00000589828 FAM196BA6NMK8 535 aa9.99□□□□□ -0.81
VAT1-207ENST00000589828 ENTPD3O75355 529 aa9.99□□□□□ -0.81
VAT1-207ENST00000589828 LDHBP07195 334 aaKnown RBP9.99□□□□□ -0.81
VAT1-207ENST00000589828 RFX5P48382 616 aaPredicted RBP9.99□□□□□ -0.81
VAT1-207ENST00000589828 CACNB2Q08289 660 aaPredicted RBP9.99□□□□□ -0.81
VAT1-207ENST00000589828 RRP1BQ14684 758 aaKnown RBP9.99□□□□□ -0.81
VAT1-207ENST00000589828 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
VAT1-207ENST00000589828 UNC80Q8N2C7 3258 aa9.99□□□□□ -0.81
VAT1-207ENST00000589828 CCND3P30281 292 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 GCLCP48506 637 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 HMGCS2P54868 508 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 SPP2Q13103 211 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 CCL14Q16627 93 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 ZSCAN29Q8IWY8 852 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 PROCA1Q8NCQ7 364 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 MAFAQ8NHW3 353 aaPredicted RBP9.98□□□□□ -0.81
VAT1-207ENST00000589828 LPIN2Q92539 896 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 TXNRD2Q9NNW7 524 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 MORF4L1Q9UBU8 362 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 RAPGEFL1Q9UHV5 662 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 GAKO14976 1311 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 MGAMO43451 1857 aa9.98□□□□□ -0.81
VAT1-207ENST00000589828 SLC5A1P13866 664 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 PHKA1P46020 1223 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 PICALMQ13492 652 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 ZNF697Q5TEC3 545 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 POTEEQ6S8J3 1075 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 ATG9AQ7Z3C6 839 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 MYLIPQ8WY64 445 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 USP6NLQ92738 828 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
VAT1-207ENST00000589828 SALL1Q9NSC2 1324 aa9.97□□□□□ -0.81
VAT1-207ENST00000589828 DDX60LQ5H9U9 1706 aaKnown RBP9.96□□□□□ -0.81
VAT1-207ENST00000589828 EYA2O00167 538 aa9.96□□□□□ -0.82
VAT1-207ENST00000589828 XRCC5P13010 732 aaKnown RBP9.96□□□□□ -0.82
VAT1-207ENST00000589828 RHBDL3P58872 404 aa9.96□□□□□ -0.82
VAT1-207ENST00000589828 Q3C1V9 767 aa9.96□□□□□ -0.82
VAT1-207ENST00000589828 SH3D19Q5HYK7 790 aa9.96□□□□□ -0.82
VAT1-207ENST00000589828 ZNF280CQ8ND82 737 aa9.96□□□□□ -0.82
VAT1-207ENST00000589828 P2RX7Q99572 595 aaKnown RBP9.96□□□□□ -0.82
VAT1-207ENST00000589828 TTYH1Q9H313 450 aaPredicted RBP9.96□□□□□ -0.82
VAT1-207ENST00000589828 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
VAT1-207ENST00000589828 SPTBN5Q9NRC6 3674 aaKnown RBP9.96□□□□□ -0.82
VAT1-207ENST00000589828 DOCK3Q8IZD9 2030 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 TBC1D12O60347 775 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 COL9A1P20849 921 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 ADORA1P30542 326 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 BTDP43251 543 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
VAT1-207ENST00000589828 JAG1P78504 1218 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 SHHQ15465 462 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 ZNF384Q8TF68 577 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 FAM163AQ96GL9 167 aaPredicted RBP9.95□□□□□ -0.82
VAT1-207ENST00000589828 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 SENP6Q9GZR1 1112 aaPredicted RBP9.95□□□□□ -0.82
VAT1-207ENST00000589828 OSBPL5Q9H0X9 879 aaPredicted RBP9.95□□□□□ -0.82
VAT1-207ENST00000589828 PORCNQ9H237 461 aa9.95□□□□□ -0.82
VAT1-207ENST00000589828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.95□□□□□ -0.82
VAT1-207ENST00000589828 ZKSCAN1P17029 563 aaPredicted RBP9.94□□□□□ -0.82
VAT1-207ENST00000589828 CAP2P40123 477 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 PABPC4Q13310 644 aaKnown RBP eCLIP9.94□□□□□ -0.826e-8■■■■□ 26.7
VAT1-207ENST00000589828 ATP2B3Q16720 1220 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
VAT1-207ENST00000589828 MORN1Q5T089 497 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 LBHD1Q9BQE6 289 aaPredicted RBP9.94□□□□□ -0.82
VAT1-207ENST00000589828 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 RBPJLQ9UBG7 517 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 DENND2AQ9ULE3 1009 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 VCANP13611 3396 aa9.94□□□□□ -0.82
VAT1-207ENST00000589828 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 HOXA7P31268 230 aaPredicted RBP9.93□□□□□ -0.82
VAT1-207ENST00000589828 RTP1P59025 263 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 HERVK_113P62684 666 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 GPR142Q7Z601 462 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 GPRC5AQ8NFJ5 357 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 SOCS4Q8WXH5 440 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 FLRT1Q9NZU1 646 aa9.93□□□□□ -0.82
VAT1-207ENST00000589828 MROH7-TTC4A0A0A0MT08 1334 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 PHIPQ8WWQ0 1821 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 GPR75-ASB3A0A0A6YYF3 556 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 IRX3P78415 501 aaPredicted RBP9.92□□□□□ -0.82
VAT1-207ENST00000589828 MTMR2Q13614 643 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 RASGRF1Q13972 1273 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 CCDC102BQ68D86 513 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 DZIP1Q86YF9 867 aaKnown RBP9.92□□□□□ -0.82
VAT1-207ENST00000589828 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
VAT1-207ENST00000589828 SIL1Q9H173 461 aa9.92□□□□□ -0.82
VAT1-207ENST00000589828 GNL3LQ9NVN8 582 aaKnown RBP9.92□□□□□ -0.82
VAT1-207ENST00000589828 ABCF2Q9UG63 623 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms