RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 CDK5RAP2Q96SN8 1893 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 LAMA4Q16363 1823 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 DDX60LQ5H9U9 1706 aaKnown RBP20.9■□□□□ 0.94
TMED1-205ENST00000589638 ROBO3Q96MS0 1386 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 ST18O60284 1047 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 PDE4BQ07343 736 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 CHST3Q7LGC8 479 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 MB21D2Q8IYB1 491 aaPredicted RBP20.9■□□□□ 0.94
TMED1-205ENST00000589638 LRRC2Q9BYS8 371 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 KRT23Q9C075 422 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 TMEM39BQ9GZU3 492 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 DHX36Q9H2U1 1008 aaKnown RBP20.9■□□□□ 0.94
TMED1-205ENST00000589638 CNNM2Q9H8M5 875 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 GGA3Q9NZ52 723 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMED1-205ENST00000589638 ECM29Q5VYK3 1845 aa20.9■□□□□ 0.94
TMED1-205ENST00000589638 HMGB1P09429 215 aaKnown RBP20.89■□□□□ 0.93
TMED1-205ENST00000589638 EPHX2P34913 555 aa20.89■□□□□ 0.93
TMED1-205ENST00000589638 NOL8Q76FK4 1167 aaKnown RBP20.89■□□□□ 0.93
TMED1-205ENST00000589638 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.93
TMED1-205ENST00000589638 FAM83AQ86UY5 434 aa20.89■□□□□ 0.93
TMED1-205ENST00000589638 MKNK2Q9HBH9 465 aa20.89■□□□□ 0.93
TMED1-205ENST00000589638 FOCADQ5VW36 1801 aa20.89■□□□□ 0.93
TMED1-205ENST00000589638 LAMB1P07942 1786 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 PRC1O43663 620 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 RANBP6O60518 1105 aaKnown RBP20.88■□□□□ 0.93
TMED1-205ENST00000589638 KDM4AO75164 1064 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 CD2BP2O95400 341 aaKnown RBP20.88■□□□□ 0.93
TMED1-205ENST00000589638 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 CDK8P49336 464 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 TNFAIP1Q13829 316 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 RASA3Q14644 834 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 C16orf86Q6ZW13 317 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 CYB5R4Q7L1T6 521 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 CRACR2BQ8N4Y2 399 aaPredicted RBP20.88■□□□□ 0.93
TMED1-205ENST00000589638 CSRNP1Q96S65 589 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
TMED1-205ENST00000589638 IQCA1LA6NCM1 817 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 FGRP09769 529 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
TMED1-205ENST00000589638 MCM5P33992 734 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 APOBEC3FQ8IUX4 373 aaKnown RBP20.87■□□□□ 0.93
TMED1-205ENST00000589638 CDAN1Q8IWY9 1227 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 ESR2Q92731 530 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 TTC14Q96N46 770 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 PI4KBQ9UBF8 816 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 SERPINB13Q9UIV8 391 aa20.87■□□□□ 0.93
TMED1-205ENST00000589638 ATRNL1Q5VV63 1379 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 FAM196BA6NMK8 535 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 ORC4O43929 436 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 AK2P54819 239 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 ANTXR2P58335 489 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 FGD1P98174 961 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 EXOSC10Q01780 885 aaKnown RBP20.86■□□□□ 0.93
TMED1-205ENST00000589638 GABPAQ06546 454 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 EAPPQ56P03 285 aaPredicted RBP20.86■□□□□ 0.93
TMED1-205ENST00000589638 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 Q6ZUG5 572 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 USP50Q70EL3 339 aaPredicted RBP20.86■□□□□ 0.93
TMED1-205ENST00000589638 HSCBQ8IWL3 235 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 EHD4Q9H223 541 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
TMED1-205ENST00000589638 COL2A1P02458 1487 aaPredicted RBP20.86■□□□□ 0.93
TMED1-205ENST00000589638 MYH1P12882 1939 aa20.86■□□□□ 0.93
TMED1-205ENST00000589638 POTECB2RU33 542 aa20.85■□□□□ 0.93
TMED1-205ENST00000589638 ZNF444Q8N0Y2 327 aaPredicted RBP20.85■□□□□ 0.93
TMED1-205ENST00000589638 LARP6Q9BRS8 491 aaKnown RBP20.85■□□□□ 0.93
TMED1-205ENST00000589638 DEFB129Q9H1M3 183 aa20.85■□□□□ 0.93
TMED1-205ENST00000589638 ZNF287Q9HBT7 754 aa20.85■□□□□ 0.93
TMED1-205ENST00000589638 ZSWIM5Q9P217 1185 aa20.85■□□□□ 0.93
TMED1-205ENST00000589638 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
TMED1-205ENST00000589638 TSPY2A6NKD2 308 aa20.84■□□□□ 0.93
TMED1-205ENST00000589638 SNX21Q969T3 373 aa20.84■□□□□ 0.93
TMED1-205ENST00000589638 ZKSCAN3Q9BRR0 538 aa20.84■□□□□ 0.93
TMED1-205ENST00000589638 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
TMED1-205ENST00000589638 RASA1P20936 1047 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 SHMT1P34896 483 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 TFAP4Q01664 338 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 BECN1Q14457 450 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
TMED1-205ENST00000589638 ZNF526Q8TF50 670 aaPredicted RBP20.83■□□□□ 0.93
TMED1-205ENST00000589638 DCPSQ96C86 337 aaKnown RBP20.83■□□□□ 0.93
TMED1-205ENST00000589638 DNAJC18Q9H819 358 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 RRAGCQ9HB90 399 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 GPHNQ9NQX3 736 aaPredicted RBP20.83■□□□□ 0.93
TMED1-205ENST00000589638 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
TMED1-205ENST00000589638 IFIT3O14879 490 aaKnown RBP20.82■□□□□ 0.92
TMED1-205ENST00000589638 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
TMED1-205ENST00000589638 PRAMEF18Q5VWM3 479 aa20.82■□□□□ 0.92
TMED1-205ENST00000589638 BRF1Q92994 677 aa20.82■□□□□ 0.92
TMED1-205ENST00000589638 TEPSINQ96N21 525 aa20.82■□□□□ 0.92
TMED1-205ENST00000589638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
TMED1-205ENST00000589638 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 WDR19Q8NEZ3 1342 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 SH2B2O14492 632 aaPredicted RBP20.81■□□□□ 0.92
TMED1-205ENST00000589638 TSPY3P0CV98 308 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 TSPY8P0CW00 308 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 ANKRD1Q15327 319 aa20.81■□□□□ 0.92
TMED1-205ENST00000589638 TMEM67Q5HYA8 995 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms