RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ZNF157P51786 506 aaPredicted RBP25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 SLC4A8Q2Y0W8 1093 aa25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 LDLRAD1Q5T700 205 aa25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 TRIM34Q9BYJ4 488 aa25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 UPF2Q9HAU5 1272 aaKnown RBP25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 OTOFQ9HC10 1997 aa25.38■■□□□ 1.65
R3HDM4-204ENST00000589428 GRM1Q13255 1194 aa25.38■■□□□ 1.65
R3HDM4-204ENST00000589428 TTC6Q86TZ1 520 aa25.38■■□□□ 1.65
R3HDM4-204ENST00000589428 AMOTL1Q8IY63 956 aa25.38■■□□□ 1.65
R3HDM4-204ENST00000589428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.38■■□□□ 1.654e-29■■□□□ 13.9
R3HDM4-204ENST00000589428 LSG1Q9H089 658 aaKnown RBP25.38■■□□□ 1.65
R3HDM4-204ENST00000589428 POLR3DP05423 398 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 CYP4F22Q6NT55 531 aa25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 CRACR2BQ8N4Y2 399 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 CAPNS2Q96L46 248 aa25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 USP26Q9BXU7 913 aa25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 HERC5Q9UII4 1024 aaKnown RBP25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 CSADQ9Y600 493 aa25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 MAP3K9P80192 1104 aa25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-204ENST00000589428 TBC1D12O60347 775 aa25.36■■□□□ 1.65
R3HDM4-204ENST00000589428 PTH1RQ03431 593 aa25.36■■□□□ 1.65
R3HDM4-204ENST00000589428 KIAA1211Q6ZU35 1233 aa25.36■■□□□ 1.65
R3HDM4-204ENST00000589428 CCDC102AQ96A19 550 aa25.36■■□□□ 1.65
R3HDM4-204ENST00000589428 CEP350Q5VT06 3117 aa25.36■■□□□ 1.65
R3HDM4-204ENST00000589428 SIPA1L1O43166 1804 aa25.35■■□□□ 1.65
R3HDM4-204ENST00000589428 APPP05067 770 aa25.35■■□□□ 1.65
R3HDM4-204ENST00000589428 MAP3K10Q02779 954 aa25.35■■□□□ 1.65
R3HDM4-204ENST00000589428 FOXP4Q8IVH2 680 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-204ENST00000589428 FAM196BA6NMK8 535 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 VEGFBP49765 207 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 VGLL4Q14135 290 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 GIMAP6Q6P9H5 292 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 SLC10A4Q96EP9 437 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 CLMNQ96JQ2 1002 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 TBC1D32Q96NH3 1257 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 WDR33Q9C0J8 1336 aaKnown RBP25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 GSG1L2A8MUP6 293 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 RASAL3Q86YV0 1011 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 DNAJC5GQ8N7S2 189 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 C22orf23Q9BZE7 217 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 NACAP1Q9BZK3 213 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 EHD4Q9H223 541 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 ARPP21Q9UBL0 812 aaPredicted RBP25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 SERPINB13Q9UIV8 391 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 ZNF112Q9UJU3 913 aa25.34■■□□□ 1.65
R3HDM4-204ENST00000589428 BAZ2AQ9UIF9 1905 aaKnown RBP25.33■■□□□ 1.65
R3HDM4-204ENST00000589428 SLC10A3P09131 477 aa25.33■■□□□ 1.65
R3HDM4-204ENST00000589428 SLURP2P0DP57 97 aa25.33■■□□□ 1.65
R3HDM4-204ENST00000589428 TDO2P48775 406 aa25.33■■□□□ 1.65
R3HDM4-204ENST00000589428 VPS53Q5VIR6 699 aa25.33■■□□□ 1.65
R3HDM4-204ENST00000589428 PATL2C9JE40 543 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 EPB41L2O43491 1005 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 INPP5BP32019 993 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 ZKSCAN4Q969J2 545 aaPredicted RBP25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 ELP3Q9H9T3 547 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 USP17L12C9JPN9 530 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 USP17L21D6R901 530 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 FOXP2O15409 715 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 PLCD1P51178 756 aa25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 METTL16Q86W50 562 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 EPB41L4AQ9HCS5 686 aaPredicted RBP25.32■■□□□ 1.64
R3HDM4-204ENST00000589428 PHF20L1A8MW92 1017 aa25.31■■□□□ 1.64
R3HDM4-204ENST00000589428 NOGQ13253 232 aa25.31■■□□□ 1.64
R3HDM4-204ENST00000589428 MAP4K1Q92918 833 aa25.31■■□□□ 1.64
R3HDM4-204ENST00000589428 CYP2D6P10635 497 aa25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 HSPD1P10809 573 aaKnown RBP25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 RBM25P49756 843 aaKnown RBP25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 IFNL3Q8IZI9 196 aa25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 NAPBQ9H115 298 aa25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 DNAJC18Q9H819 358 aa25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 SNCAIPQ9Y6H5 919 aa25.3■■□□□ 1.64
R3HDM4-204ENST00000589428 FAM155AB1AL88 458 aaPredicted RBP25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 NOL9Q5SY16 702 aaKnown RBP25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 C12orf60Q5U649 245 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 CTR9Q6PD62 1173 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 CTNND1O60716 968 aaKnown RBP25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 SCYL3Q8IZE3 742 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 WNK4Q96J92 1243 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 DSCC1Q9BVC3 393 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 PICK1Q9NRD5 415 aa25.29■■□□□ 1.64
R3HDM4-204ENST00000589428 THSD7BQ9C0I4 1608 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 CYP2D7A0A087X1C5 515 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 SBK1Q52WX2 424 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 OPTNQ96CV9 577 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 TAOK2Q9UL54 1235 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 RBM8AQ9Y5S9 174 aaKnown RBP25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 DOCK1Q14185 1865 aa25.28■■□□□ 1.64
R3HDM4-204ENST00000589428 LAMB1P07942 1786 aa25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 AOC2O75106 756 aa25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 ZBTB48P10074 688 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 MKRN3Q13064 507 aaKnown RBP25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 SPRYD7Q5W111 196 aa25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 ERO1BQ86YB8 467 aa25.27■■□□□ 1.64
R3HDM4-204ENST00000589428 SPDYE5A6NIY4 337 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 MINDY4BA8MYZ0 360 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 HSPA4P34932 840 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 EVX2Q03828 476 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms