RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 SLC3A2P08195 630 aaKnown RBP29.27■■■□□ 2.28
RFX1-205ENST00000589239 HIRAP54198 1017 aaPredicted RBP29.27■■■□□ 2.28
RFX1-205ENST00000589239 CHST3Q7LGC8 479 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 TTC6Q86TZ1 520 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 ZSCAN29Q8IWY8 852 aaPredicted RBP29.27■■■□□ 2.28
RFX1-205ENST00000589239 ST18O60284 1047 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 HMGB1P09429 215 aaKnown RBP29.26■■■□□ 2.27
RFX1-205ENST00000589239 FKBP1CQ5VVH2 108 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 MB21D2Q8IYB1 491 aaPredicted RBP29.26■■■□□ 2.27
RFX1-205ENST00000589239 CNTNAP1P78357 1384 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 ROBO3Q96MS0 1386 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 DHX32Q7L7V1 743 aaKnown RBP29.26■■■□□ 2.27
RFX1-205ENST00000589239 SLC44A5Q8NCS7 719 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 TTC14Q96N46 770 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 CNNM2Q9H8M5 875 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 ADARB2Q9NS39 739 aaKnown RBP29.26■■■□□ 2.27
RFX1-205ENST00000589239 HACL1Q9UJ83 578 aa29.26■■■□□ 2.27
RFX1-205ENST00000589239 FGRP09769 529 aa29.25■■■□□ 2.27
RFX1-205ENST00000589239 DHX36Q9H2U1 1008 aaKnown RBP29.25■■■□□ 2.27
RFX1-205ENST00000589239 PDRG1Q9NUG6 133 aa29.25■■■□□ 2.27
RFX1-205ENST00000589239 PDE4BQ07343 736 aa29.24■■■□□ 2.27
RFX1-205ENST00000589239 RTN4Q9NQC3 1192 aaKnown RBP29.24■■■□□ 2.27
RFX1-205ENST00000589239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.24■■■□□ 2.27
RFX1-205ENST00000589239 FAM151AQ8WW52 585 aa29.24■■■□□ 2.27
RFX1-205ENST00000589239 LRRC2Q9BYS8 371 aa29.24■■■□□ 2.27
RFX1-205ENST00000589239 KRT23Q9C075 422 aa29.24■■■□□ 2.27
RFX1-205ENST00000589239 KDM4AO75164 1064 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 HLA-DOAP06340 250 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 TMEM39BQ9GZU3 492 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 SLURP2P0DP57 97 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 EXOSC10Q01780 885 aaKnown RBP29.23■■■□□ 2.27
RFX1-205ENST00000589239 CYB5R4Q7L1T6 521 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 FAM83AQ86UY5 434 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 ATRNL1Q5VV63 1379 aa29.23■■■□□ 2.27
RFX1-205ENST00000589239 PCP11498 1178 aaKnown RBP29.22■■■□□ 2.27
RFX1-205ENST00000589239 MCM5P33992 734 aa29.22■■■□□ 2.27
RFX1-205ENST00000589239 ANTXR2P58335 489 aa29.22■■■□□ 2.27
RFX1-205ENST00000589239 ANGEL2Q5VTE6 544 aaKnown RBP29.22■■■□□ 2.27
RFX1-205ENST00000589239 C16orf86Q6ZW13 317 aa29.22■■■□□ 2.27
RFX1-205ENST00000589239 ZSWIM5Q9P217 1185 aa29.22■■■□□ 2.27
RFX1-205ENST00000589239 SERPINB13Q9UIV8 391 aa29.22■■■□□ 2.27
RFX1-205ENST00000589239 SNX21Q969T3 373 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 TBC1D2Q9BYX2 928 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 PI4KBQ9UBF8 816 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 AK2P54819 239 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 GABPAQ06546 454 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 NOL8Q76FK4 1167 aaKnown RBP29.21■■■□□ 2.27
RFX1-205ENST00000589239 CDAN1Q8IWY9 1227 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 MKNK2Q9HBH9 465 aa29.21■■■□□ 2.27
RFX1-205ENST00000589239 PRC1O43663 620 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 ORC4O43929 436 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 RANBP6O60518 1105 aaKnown RBP29.2■■■□□ 2.27
RFX1-205ENST00000589239 CDK8P49336 464 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 RASA3Q14644 834 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 CSRNP1Q96S65 589 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 LARP6Q9BRS8 491 aaKnown RBP29.2■■■□□ 2.27
RFX1-205ENST00000589239 GGA3Q9NZ52 723 aa29.2■■■□□ 2.27
RFX1-205ENST00000589239 TNFAIP1Q13829 316 aa29.2■■■□□ 2.26
RFX1-205ENST00000589239 ESR2Q92731 530 aa29.2■■■□□ 2.26
RFX1-205ENST00000589239 COL2A1P02458 1487 aaPredicted RBP29.19■■■□□ 2.26
RFX1-205ENST00000589239 EPHX2P34913 555 aa29.19■■■□□ 2.26
RFX1-205ENST00000589239 TNNI2P48788 182 aa29.19■■■□□ 2.26
RFX1-205ENST00000589239 Q6ZUG5 572 aa29.19■■■□□ 2.26
RFX1-205ENST00000589239 EHD4Q9H223 541 aa29.19■■■□□ 2.26
RFX1-205ENST00000589239 FAM196BA6NMK8 535 aa29.18■■■□□ 2.26
RFX1-205ENST00000589239 POTECB2RU33 542 aa29.18■■■□□ 2.26
RFX1-205ENST00000589239 FAM47AQ5JRC9 791 aa29.18■■■□□ 2.26
RFX1-205ENST00000589239 HSCBQ8IWL3 235 aa29.18■■■□□ 2.26
RFX1-205ENST00000589239 DNAJC18Q9H819 358 aa29.18■■■□□ 2.26
RFX1-205ENST00000589239 FGD1P98174 961 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 TOB2Q14106 344 aaPredicted RBP29.17■■■□□ 2.26
RFX1-205ENST00000589239 CRACR2BQ8N4Y2 399 aaPredicted RBP29.17■■■□□ 2.26
RFX1-205ENST00000589239 DEFB129Q9H1M3 183 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 ZNF287Q9HBT7 754 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 GPHNQ9NQX3 736 aaPredicted RBP29.17■■■□□ 2.26
RFX1-205ENST00000589239 SIPA1L1O43166 1804 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 ZKSCAN3Q9BRR0 538 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 PGAP2Q9UHJ9 254 aa29.17■■■□□ 2.26
RFX1-205ENST00000589239 IQCA1LA6NCM1 817 aa29.16■■■□□ 2.26
RFX1-205ENST00000589239 RASA1P20936 1047 aa29.16■■■□□ 2.26
RFX1-205ENST00000589239 BECN1Q14457 450 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 ALDH8A1Q9H2A2 487 aaPredicted RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 SWAP70Q9UH65 585 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 SHMT1P34896 483 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 SLC4A3P48751 1232 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 USP50Q70EL3 339 aaPredicted RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 APOBEC3FQ8IUX4 373 aaKnown RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 FOXP4Q8IVH2 680 aaPredicted RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 ZNF444Q8N0Y2 327 aaPredicted RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 BRF1Q92994 677 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 TAF1DQ9H5J8 278 aaPredicted RBP29.15■■■□□ 2.26
RFX1-205ENST00000589239 WDR19Q8NEZ3 1342 aa29.15■■■□□ 2.26
RFX1-205ENST00000589239 TSPY2A6NKD2 308 aa29.14■■■□□ 2.26
RFX1-205ENST00000589239 TEPSINQ96N21 525 aa29.14■■■□□ 2.26
RFX1-205ENST00000589239 TFAP4Q01664 338 aa29.14■■■□□ 2.25
RFX1-205ENST00000589239 GSE1Q14687 1217 aa29.14■■■□□ 2.25
RFX1-205ENST00000589239 TRIM34Q9BYJ4 488 aa29.14■■■□□ 2.25
RFX1-205ENST00000589239 WDR90Q96KV7 1748 aa29.13■■■□□ 2.25
RFX1-205ENST00000589239 K7ELQ4 463 aaPredicted RBP29.13■■■□□ 2.25
RFX1-205ENST00000589239 MCM2P49736 904 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms