RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 CCDC87Q9NVE4 849 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 PCDHA5Q9Y5H7 936 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 KRT86O43790 486 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 NOSTRINQ8IVI9 506 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 IL25Q9H293 177 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 PDE8BO95263 885 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 DNAJC21Q5F1R6 531 aaKnown RBP13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 ARHGAP31Q2M1Z3 1444 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 CYP27B1O15528 508 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 COBLO75128 1261 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 CMA1P23946 247 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 CEP112Q8N8E3 955 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
PRKAR1A-217ENST00000589228 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TUBB4AP04350 444 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TXKP42681 527 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 PPARAQ07869 468 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 ZNF804AQ7Z570 1209 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 SYCP3Q8IZU3 236 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 FANCBQ8NB91 859 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 RBM28Q9NW13 759 aaKnown RBP13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 VPS18Q9P253 973 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 IMPACTQ9P2X3 320 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 CAPN2P17655 700 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TFAP4Q01664 338 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 PDE4DQ08499 809 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TACC1O75410 805 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 GNA11P29992 359 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 RCOR1Q9UKL0 485 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TNKSO95271 1327 aa13.62□□□□□ -0.23
PRKAR1A-217ENST00000589228 TBCAO75347 108 aaKnown RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 SLF1Q9BQI6 1058 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 PRKAB2O43741 272 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 KCNQ4P56696 695 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 KRT83P78385 493 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 MRFAP1L1Q96HT8 127 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 TTC14Q96N46 770 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 PSMB7Q99436 277 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 TMEM94Q12767 1356 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 MROH5Q6ZUA9 1318 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 ST5P78524 1137 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 RESTQ13127 1097 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 RNF187Q5TA31 235 aaPredicted RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 NAA15Q9BXJ9 866 aaKnown RBP13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
PRKAR1A-217ENST00000589228 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 NOC4LQ9BVI4 516 aaKnown RBP13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.236e-10■□□□□ 10.8
PRKAR1A-217ENST00000589228 ALKQ9UM73 1620 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 TRAF5O00463 557 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 LINC00301Q8NCQ3 95 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 TIGD1Q96MW7 591 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 ANKRD2Q9GZV1 360 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 PAK1Q13153 545 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 DYMQ7RTS9 669 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
PRKAR1A-217ENST00000589228 ZMYM6O95789 1325 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 CCNT1O60563 726 aaKnown RBP13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 UFL1O94874 794 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 PPARDQ03181 441 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 NR5A1Q13285 461 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 TNIP1Q15025 636 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 MED14O60244 1454 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 FAM170AA1A519 330 aa13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
PRKAR1A-217ENST00000589228 CHMP4BP1P59074 171 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms