RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
VPS25-202ENST00000589219 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 RBM43Q6ZSC3 357 aaKnown RBP11.6□□□□□ -0.55
VPS25-202ENST00000589219 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 C8orf76Q96K31 380 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 CLSTN2Q9H4D0 955 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 ARMT1Q9H993 441 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
VPS25-202ENST00000589219 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
VPS25-202ENST00000589219 MINPP1Q9UNW1 487 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 ATP6V0A2Q9Y487 856 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 TCHHQ07283 1943 aa11.6□□□□□ -0.55
VPS25-202ENST00000589219 MYO5AQ9Y4I1 1855 aaKnown RBP11.59□□□□□ -0.55
VPS25-202ENST00000589219 MAGEB6P1A0A0J9YX57 407 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 GSG1L2A8MUP6 293 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 B4E1Z4 1266 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 DTNBO60941 627 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
VPS25-202ENST00000589219 CYP7A1P22680 504 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 CYB5R4Q7L1T6 521 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 RNF214Q8ND24 703 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
VPS25-202ENST00000589219 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 RCOR1Q9UKL0 485 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 PASKQ96RG2 1323 aa11.59□□□□□ -0.55
VPS25-202ENST00000589219 GOLGA8AA7E2F4 631 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 SNAP23O00161 211 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 CTAGE5O15320 804 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 ZBTB43O43298 467 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 PPIP5K2O43314 1243 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 YEATS4O95619 227 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 FDPSP14324 419 aaKnown RBP11.58□□□□□ -0.56
VPS25-202ENST00000589219 LIG1P18858 919 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
VPS25-202ENST00000589219 RPS8P62241 208 aaKnown RBP11.58□□□□□ -0.56
VPS25-202ENST00000589219 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 GIMAP6Q6P9H5 292 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 POTEHQ6S545 545 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 FBXO33Q7Z6M2 555 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 SP8Q8IXZ3 490 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 CELF1Q92879 486 aaKnown RBP11.58□□□□□ -0.56
VPS25-202ENST00000589219 TNMDQ9H2S6 317 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
VPS25-202ENST00000589219 ADAMTSL1Q8N6G6 1762 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 ERICH2A1L162 156 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 CAVIN2O95810 425 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 GYG1P46976 350 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 NT5C2P49902 561 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 FOSBP53539 338 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 NFXL1Q6ZNB6 911 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 IGDCC4Q8TDY8 1250 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 WASF1Q92558 559 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 PGBD1Q96JS3 809 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 RTFDC1Q9BY42 306 aaPredicted RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 DACT1Q9NYF0 836 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 RTEL1Q9NZ71 1219 aa11.57□□□□□ -0.56
VPS25-202ENST00000589219 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
VPS25-202ENST00000589219 LAMB1P07942 1786 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 MSNP26038 577 aaKnown RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 PPARAQ07869 468 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 GRAPQ13588 217 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 AOC3Q16853 763 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 TMTC2Q8N394 836 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 MPNDQ8N594 471 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 USP28Q96RU2 1077 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 RIOK1Q9BRS2 568 aaKnown RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 POLR3EQ9NVU0 708 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
VPS25-202ENST00000589219 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 MYH13Q9UKX3 1938 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
VPS25-202ENST00000589219 COL4A5P29400 1685 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 CNTNAP1P78357 1384 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms