RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
DNMT1-217ENST00000589091 AATFQ9NY61 560 aaKnown RBP eCLIP17.89■□□□□ 0.45
DNMT1-217ENST00000589091 HERC5Q9UII4 1024 aaKnown RBP17.89■□□□□ 0.45
DNMT1-217ENST00000589091 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
DNMT1-217ENST00000589091 SLC45A1Q9Y2W3 748 aa17.89■□□□□ 0.45
DNMT1-217ENST00000589091 HOXD10P28358 340 aa17.88■□□□□ 0.45
DNMT1-217ENST00000589091 ZAP70P43403 619 aa17.88■□□□□ 0.45
DNMT1-217ENST00000589091 SH3RF3Q8TEJ3 882 aaPredicted RBP17.88■□□□□ 0.45
DNMT1-217ENST00000589091 CPA4Q9UI42 421 aa17.88■□□□□ 0.45
DNMT1-217ENST00000589091 PTCH2Q9Y6C5 1203 aa17.88■□□□□ 0.45
DNMT1-217ENST00000589091 HMMRO75330 724 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 GPAT2Q6NUI2 795 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 GADL1Q6ZQY3 521 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
DNMT1-217ENST00000589091 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 TMEM106CQ9BVX2 250 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 TLR7Q9NYK1 1049 aaKnown RBP17.87■□□□□ 0.45
DNMT1-217ENST00000589091 PI4KBQ9UBF8 816 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 EXOC6BQ9Y2D4 811 aa17.87■□□□□ 0.45
DNMT1-217ENST00000589091 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
DNMT1-217ENST00000589091 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
DNMT1-217ENST00000589091 HTTP42858 3142 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 POTEFA5A3E0 1075 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 SLURP2P0DP57 97 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 BCRP11274 1271 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 FLT1P17948 1338 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 CAP2P40123 477 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 PSMC4P43686 418 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 AACSQ86V21 672 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 PROCA1Q8NCQ7 364 aaPredicted RBP17.85■□□□□ 0.45
DNMT1-217ENST00000589091 TGFBRAP1Q8WUH2 860 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 AS3MTQ9HBK9 375 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 PIH1D3Q9NQM4 214 aaKnown RBP17.85■□□□□ 0.45
DNMT1-217ENST00000589091 PNMA3Q9UL41 463 aa17.85■□□□□ 0.45
DNMT1-217ENST00000589091 TRIM75PA6NK02 468 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 IDH1O75874 414 aaKnown RBP17.84■□□□□ 0.45
DNMT1-217ENST00000589091 PRPF38BQ5VTL8 546 aaKnown RBP17.84■□□□□ 0.45
DNMT1-217ENST00000589091 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
DNMT1-217ENST00000589091 CLASRPQ8N2M8 674 aaKnown RBP17.84■□□□□ 0.45
DNMT1-217ENST00000589091 RHPN1Q8TCX5 695 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 KIF1BPQ96EK5 621 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 TRIM34Q9BYJ4 488 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 GINM1Q9NU53 330 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 SRRDQ9UH36 339 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 AGTPBP1Q9UPW5 1226 aa17.84■□□□□ 0.45
DNMT1-217ENST00000589091 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
DNMT1-217ENST00000589091 USP17L5A8MUK1 530 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 FMNL1O95466 1100 aaPredicted RBP17.83■□□□□ 0.44
DNMT1-217ENST00000589091 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 CYP2C8P10632 490 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 CYP7A1P22680 504 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 FCGRTP55899 365 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 MAPKAPK5Q8IW41 473 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 ZNF280CQ8ND82 737 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.44
DNMT1-217ENST00000589091 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 COG6Q9Y2V7 657 aa17.83■□□□□ 0.44
DNMT1-217ENST00000589091 MYPNQ86TC9 1320 aa17.82■□□□□ 0.44
DNMT1-217ENST00000589091 ASNSP08243 561 aa17.82■□□□□ 0.44
DNMT1-217ENST00000589091 OSBPP22059 807 aa17.82■□□□□ 0.44
DNMT1-217ENST00000589091 PABPC4Q13310 644 aaKnown RBP eCLIP17.82■□□□□ 0.44
DNMT1-217ENST00000589091 TTF1Q15361 905 aaPredicted RBP17.82■□□□□ 0.44
DNMT1-217ENST00000589091 METTL16Q86W50 562 aaKnown RBP17.82■□□□□ 0.44
DNMT1-217ENST00000589091 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
DNMT1-217ENST00000589091 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 CTGFP29279 349 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 SPP2Q13103 211 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 SLC4A8Q2Y0W8 1093 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 RAET1EQ8TD07 263 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.81■□□□□ 0.44
DNMT1-217ENST00000589091 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
DNMT1-217ENST00000589091 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
DNMT1-217ENST00000589091 CENPFP49454 3210 aa17.8■□□□□ 0.44
DNMT1-217ENST00000589091 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
DNMT1-217ENST00000589091 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
DNMT1-217ENST00000589091 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
DNMT1-217ENST00000589091 PALD1Q9ULE6 856 aa17.8■□□□□ 0.44
DNMT1-217ENST00000589091 ECM2O94769 699 aaPredicted RBP17.79■□□□□ 0.44
DNMT1-217ENST00000589091 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
DNMT1-217ENST00000589091 GRK4P32298 578 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 USP5P45974 858 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
DNMT1-217ENST00000589091 PDE3AQ14432 1141 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 WDR18Q9BV38 432 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
DNMT1-217ENST00000589091 EN2P19622 333 aaPredicted RBP17.78■□□□□ 0.44
DNMT1-217ENST00000589091 GCLCP48506 637 aaPredicted RBP17.78■□□□□ 0.44
DNMT1-217ENST00000589091 HMGCS2P54868 508 aa17.78■□□□□ 0.44
DNMT1-217ENST00000589091 RRP1BQ14684 758 aaKnown RBP17.78■□□□□ 0.44
DNMT1-217ENST00000589091 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
DNMT1-217ENST00000589091 TREML2Q5T2D2 321 aa17.78■□□□□ 0.44
DNMT1-217ENST00000589091 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
DNMT1-217ENST00000589091 DNAJC18Q9H819 358 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms