RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 FSD1Q9BTV5 496 aa21.11■□□□□ 0.97
DNMT1-215ENST00000588913 ZNF341Q9BYN7 854 aa21.11■□□□□ 0.97
DNMT1-215ENST00000588913 ANKRD13AQ8IZ07 590 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 WNK4Q96J92 1243 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 ATAD5Q96QE3 1844 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 PHIPQ8WWQ0 1821 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 CYP2D6P10635 497 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 USP5P45974 858 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 JAG1P78504 1218 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 TMED8Q6PL24 325 aaPredicted RBP21.1■□□□□ 0.97
DNMT1-215ENST00000588913 DOCK1Q14185 1865 aa21.1■□□□□ 0.97
DNMT1-215ENST00000588913 GSPT1P15170 499 aaKnown RBP21.09■□□□□ 0.97
DNMT1-215ENST00000588913 SPRYD7Q5W111 196 aa21.09■□□□□ 0.97
DNMT1-215ENST00000588913 APPBP2Q92624 585 aa21.09■□□□□ 0.97
DNMT1-215ENST00000588913 CCDC102AQ96A19 550 aa21.09■□□□□ 0.97
DNMT1-215ENST00000588913 SLC10A4Q96EP9 437 aa21.09■□□□□ 0.97
DNMT1-215ENST00000588913 DCP1AQ9NPI6 582 aaPredicted RBP21.09■□□□□ 0.97
DNMT1-215ENST00000588913 PLCD1P51178 756 aa21.08■□□□□ 0.97
DNMT1-215ENST00000588913 NOGQ13253 232 aa21.08■□□□□ 0.97
DNMT1-215ENST00000588913 DCAF15Q66K64 600 aa21.08■□□□□ 0.97
DNMT1-215ENST00000588913 CCDC84Q86UT8 332 aaPredicted RBP21.08■□□□□ 0.97
DNMT1-215ENST00000588913 STRBPQ96SI9 672 aaKnown RBP21.08■□□□□ 0.97
DNMT1-215ENST00000588913 CYP2D7A0A087X1C5 515 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 HSPA1AP0DMV8 641 aaKnown RBP21.08■□□□□ 0.96
DNMT1-215ENST00000588913 HSPA1BP0DMV9 641 aaKnown RBP21.08■□□□□ 0.96
DNMT1-215ENST00000588913 ZMYM1Q5SVZ6 1142 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 ZSCAN25Q6NSZ9 544 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 CCDC129Q6ZRS4 1044 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 EVI5LQ96CN4 794 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 OPTNQ96CV9 577 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 WBP1LQ9NX94 342 aa21.08■□□□□ 0.96
DNMT1-215ENST00000588913 MAP2K2P36507 400 aa21.07■□□□□ 0.96
DNMT1-215ENST00000588913 CRNKL1Q9BZJ0 848 aaKnown RBP21.07■□□□□ 0.96
DNMT1-215ENST00000588913 FOXP2O15409 715 aa21.06■□□□□ 0.96
DNMT1-215ENST00000588913 METTL16Q86W50 562 aaKnown RBP21.06■□□□□ 0.96
DNMT1-215ENST00000588913 FAM227BQ96M60 508 aa21.06■□□□□ 0.96
DNMT1-215ENST00000588913 A0A0D9SFI3 127 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 TRIM6-TRIM34B2RNG4 842 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 GPAA1O43292 621 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 TBC1D12O60347 775 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 AIDAQ96BJ3 306 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 EPB41L4AQ9HCS5 686 aaPredicted RBP21.05■□□□□ 0.96
DNMT1-215ENST00000588913 SLC4A4Q9Y6R1 1079 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 GSG1L2A8MUP6 293 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 RILPL2Q969X0 211 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 HOOK2Q96ED9 719 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 OTUD5Q96G74 571 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.05■□□□□ 0.96
DNMT1-215ENST00000588913 PI4KBQ9UBF8 816 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 TSKSQ9UJT2 592 aa21.05■□□□□ 0.96
DNMT1-215ENST00000588913 SPDYE5A6NIY4 337 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 FOXN1O15353 648 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 ZFYP08048 801 aaPredicted RBP21.04■□□□□ 0.96
DNMT1-215ENST00000588913 NOL9Q5SY16 702 aaKnown RBP21.04■□□□□ 0.96
DNMT1-215ENST00000588913 TTC22Q5TAA0 569 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 CERS3Q8IU89 383 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 DHX36Q9H2U1 1008 aaKnown RBP21.04■□□□□ 0.96
DNMT1-215ENST00000588913 MCM9Q9NXL9 1143 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 CSADQ9Y600 493 aa21.04■□□□□ 0.96
DNMT1-215ENST00000588913 UNCXA6NJT0 531 aa21.03■□□□□ 0.96
DNMT1-215ENST00000588913 MS4A4AQ96JQ5 239 aa21.03■□□□□ 0.96
DNMT1-215ENST00000588913 PTPRFP10586 1907 aa21.03■□□□□ 0.96
DNMT1-215ENST00000588913 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
DNMT1-215ENST00000588913 SLC44A5Q8NCS7 719 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 GABPAQ06546 454 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 SCYL3Q8IZE3 742 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 PTPN18Q99952 460 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 IL25Q9H293 177 aa21.02■□□□□ 0.96
DNMT1-215ENST00000588913 IGF2BP3O00425 579 aaKnown RBP eCLIP21.01■□□□□ 0.95
DNMT1-215ENST00000588913 IRF6O14896 467 aa21.01■□□□□ 0.95
DNMT1-215ENST00000588913 ZBTB48P10074 688 aaPredicted RBP21.01■□□□□ 0.95
DNMT1-215ENST00000588913 SHMT1P34896 483 aa21.01■□□□□ 0.95
DNMT1-215ENST00000588913 ZNF589Q86UQ0 364 aaPredicted RBP21.01■□□□□ 0.95
DNMT1-215ENST00000588913 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
DNMT1-215ENST00000588913 HERC5Q9UII4 1024 aaKnown RBP21.01■□□□□ 0.95
DNMT1-215ENST00000588913 USP17L12C9JPN9 530 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 USP17L21D6R901 530 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 GDF11O95390 407 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 SDSP20132 328 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 CTR9Q6PD62 1173 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 ERO1BQ86YB8 467 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 POLR3DP05423 398 aaPredicted RBP21■□□□□ 0.95
DNMT1-215ENST00000588913 PTPRAP18433 802 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 CAP2P40123 477 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 FOXP4Q8IVH2 680 aaPredicted RBP21■□□□□ 0.95
DNMT1-215ENST00000588913 BRI3BPQ8WY22 251 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 EHD4Q9H223 541 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 R3HDMLQ9H3Y0 253 aa21■□□□□ 0.95
DNMT1-215ENST00000588913 MYH8P13535 1937 aa20.99■□□□□ 0.95
DNMT1-215ENST00000588913 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
DNMT1-215ENST00000588913 TM4SF4P48230 202 aa20.99■□□□□ 0.95
DNMT1-215ENST00000588913 MAP2K1Q02750 393 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-215ENST00000588913 C12orf60Q5U649 245 aa20.99■□□□□ 0.95
DNMT1-215ENST00000588913 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-215ENST00000588913 RNF186Q9NXI6 227 aa20.99■□□□□ 0.95
DNMT1-215ENST00000588913 SERPINB13Q9UIV8 391 aa20.99■□□□□ 0.95
DNMT1-215ENST00000588913 HLA-DOAP06340 250 aa20.98■□□□□ 0.95
DNMT1-215ENST00000588913 PPIL2Q13356 520 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms