RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ESYT1Q9BSJ8 1104 aa22.68■■□□□ 1.22
CLPTM1-209ENST00000588855 ZNF341Q9BYN7 854 aa22.68■■□□□ 1.22
CLPTM1-209ENST00000588855 NAPBQ9H115 298 aa22.68■■□□□ 1.22
CLPTM1-209ENST00000588855 DNAJC18Q9H819 358 aa22.68■■□□□ 1.22
CLPTM1-209ENST00000588855 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
CLPTM1-209ENST00000588855 LAMA4Q16363 1823 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 UBE2Q2LH0YL09 131 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 HSPA6P17066 643 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 MAP3K10Q02779 954 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 MAP3K11Q16584 847 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 ABT1Q9ULW3 272 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 TLL2Q9Y6L7 1015 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 ATAD5Q96QE3 1844 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 HTRA3P83110 453 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 C12orf60Q5U649 245 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 SAPCD2Q86UD0 394 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 METTL16Q86W50 562 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 AMOTL1Q8IY63 956 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 CRACR2BQ8N4Y2 399 aaPredicted RBP22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 KLRG1Q96E93 195 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 EHD4Q9H223 541 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 HERC5Q9UII4 1024 aaKnown RBP22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 SERPINB13Q9UIV8 391 aa22.67■■□□□ 1.22
CLPTM1-209ENST00000588855 TBC1D12O60347 775 aa22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 IREB2P48200 963 aaKnown RBP22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 HUNKP57058 714 aa22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 CASC1Q6TDU7 716 aa22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 FOXP4Q8IVH2 680 aaPredicted RBP22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 WRNIP1Q96S55 665 aa22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 DOCK1Q14185 1865 aa22.66■■□□□ 1.22
CLPTM1-209ENST00000588855 MINDY4BA8MYZ0 360 aa22.65■■□□□ 1.22
CLPTM1-209ENST00000588855 ALX1Q15699 326 aa22.65■■□□□ 1.22
CLPTM1-209ENST00000588855 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 FGAP02671 866 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 GABPAQ06546 454 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 LDLRAD1Q5T700 205 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 DYNLL2Q96FJ2 89 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 DSCC1Q9BVC3 393 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 TRIM34Q9BYJ4 488 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 ZNF112Q9UJU3 913 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 ZMYM6O95789 1325 aa22.64■■□□□ 1.21
CLPTM1-209ENST00000588855 INPP5BP32019 993 aa22.63■■□□□ 1.21
CLPTM1-209ENST00000588855 PTH1RQ03431 593 aa22.63■■□□□ 1.21
CLPTM1-209ENST00000588855 SLC44A5Q8NCS7 719 aa22.63■■□□□ 1.21
CLPTM1-209ENST00000588855 ROBO3Q96MS0 1386 aa22.63■■□□□ 1.21
CLPTM1-209ENST00000588855 RRP1BQ14684 758 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 ZKSCAN4Q969J2 545 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 CLMNQ96JQ2 1002 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 CEP350Q5VT06 3117 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 SHMT1P34896 483 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 MAP3K9P80192 1104 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 PPARAQ07869 468 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 VGLL4Q14135 290 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 STK11IPQ8N1F8 1099 aa22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-209ENST00000588855 C16orf86Q6ZW13 317 aa22.61■■□□□ 1.21
CLPTM1-209ENST00000588855 TATDN1Q6P1N9 297 aa22.6■■□□□ 1.21
CLPTM1-209ENST00000588855 LSG1Q9H089 658 aaKnown RBP22.6■■□□□ 1.21
CLPTM1-209ENST00000588855 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
CLPTM1-209ENST00000588855 CSADQ9Y600 493 aa22.6■■□□□ 1.21
CLPTM1-209ENST00000588855 SNCAIPQ9Y6H5 919 aa22.6■■□□□ 1.21
CLPTM1-209ENST00000588855 RASSF10A6NK89 507 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 CDK8P49336 464 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 HAND2P61296 217 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 CTDSPL2Q05D32 466 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 KIAA1211Q6ZU35 1233 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 HHIPL1Q96JK4 782 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 ELP3Q9H9T3 547 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 SWAP70Q9UH65 585 aa22.59■■□□□ 1.21
CLPTM1-209ENST00000588855 GDF11O95390 407 aa22.58■■□□□ 1.21
CLPTM1-209ENST00000588855 SHROOM1Q2M3G4 852 aaPredicted RBP22.58■■□□□ 1.21
CLPTM1-209ENST00000588855 NOL9Q5SY16 702 aaKnown RBP22.58■■□□□ 1.21
CLPTM1-209ENST00000588855 RGMBQ6NW40 437 aa22.58■■□□□ 1.21
CLPTM1-209ENST00000588855 PHIPQ8WWQ0 1821 aa22.58■■□□□ 1.2
CLPTM1-209ENST00000588855 UNCXA6NJT0 531 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CTNND1O60716 968 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CAP2P40123 477 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 ZNF157P51786 506 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 JAG1P78504 1218 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 DEFB115Q30KQ5 88 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 PAXIP1Q6ZW49 1069 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 SCYL3Q8IZE3 742 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 MAP4K1Q92918 833 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 NBPF3Q9H094 633 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 TAOK2Q9UL54 1235 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CYP4F22Q6NT55 531 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CNKSR2Q8WXI2 1034 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CTNNA3Q9UI47 895 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 TACC3Q9Y6A5 838 aa22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 U3KPZ7 1027 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-209ENST00000588855 CERKLQ49MI3 558 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-209ENST00000588855 RASAL3Q86YV0 1011 aa22.56■■□□□ 1.2
CLPTM1-209ENST00000588855 SLC10A4Q96EP9 437 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms