RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 AATFQ9NY61 560 aaKnown RBP eCLIP18.03■□□□□ 0.48
NFIC-205ENST00000588839 CPA4Q9UI42 421 aa18.03■□□□□ 0.48
NFIC-205ENST00000588839 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
NFIC-205ENST00000588839 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
NFIC-205ENST00000588839 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
NFIC-205ENST00000588839 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
NFIC-205ENST00000588839 BRCA2P51587 3418 aa18.03■□□□□ 0.48
NFIC-205ENST00000588839 CYP2E1P05181 493 aaPredicted RBP18.02■□□□□ 0.48
NFIC-205ENST00000588839 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
NFIC-205ENST00000588839 ARHGAP39Q9C0H5 1083 aa18.02■□□□□ 0.48
NFIC-205ENST00000588839 CCDC8Q9H0W5 538 aaPredicted RBP18.02■□□□□ 0.48
NFIC-205ENST00000588839 SLC45A1Q9Y2W3 748 aa18.02■□□□□ 0.48
NFIC-205ENST00000588839 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 ZAP70P43403 619 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 GPAT2Q6NUI2 795 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 CHMP4BQ9H444 224 aaKnown RBP18.01■□□□□ 0.47
NFIC-205ENST00000588839 PI4KBQ9UBF8 816 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
NFIC-205ENST00000588839 MYH1P12882 1939 aa18.01■□□□□ 0.47
NFIC-205ENST00000588839 LOC285556D6RIA3 1793 aa18■□□□□ 0.47
NFIC-205ENST00000588839 TRIM75PA6NK02 468 aa18■□□□□ 0.47
NFIC-205ENST00000588839 HMMRO75330 724 aa18■□□□□ 0.47
NFIC-205ENST00000588839 FMNL1O95466 1100 aaPredicted RBP18■□□□□ 0.47
NFIC-205ENST00000588839 PSMC4P43686 418 aa18■□□□□ 0.47
NFIC-205ENST00000588839 PPP4CP60510 307 aa18■□□□□ 0.47
NFIC-205ENST00000588839 PRPF38BQ5VTL8 546 aaKnown RBP18■□□□□ 0.47
NFIC-205ENST00000588839 TMED8Q6PL24 325 aaPredicted RBP18■□□□□ 0.47
NFIC-205ENST00000588839 EAF2Q96CJ1 260 aaPredicted RBP18■□□□□ 0.47
NFIC-205ENST00000588839 TRIM34Q9BYJ4 488 aa18■□□□□ 0.47
NFIC-205ENST00000588839 TLR7Q9NYK1 1049 aaKnown RBP18■□□□□ 0.47
NFIC-205ENST00000588839 EXOC6BQ9Y2D4 811 aa18■□□□□ 0.47
NFIC-205ENST00000588839 POTEFA5A3E0 1075 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 CYP2C8P10632 490 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 FCGRTP55899 365 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 SLC4A8Q2Y0W8 1093 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 AACSQ86V21 672 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 SMCR8Q8TEV9 937 aaPredicted RBP17.99■□□□□ 0.47
NFIC-205ENST00000588839 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 SIPA1L1O43166 1804 aa17.99■□□□□ 0.47
NFIC-205ENST00000588839 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
NFIC-205ENST00000588839 SLURP2P0DP57 97 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 CAP2P40123 477 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 RPAP2Q8IXW5 612 aaPredicted RBP17.98■□□□□ 0.47
NFIC-205ENST00000588839 RAET1EQ8TD07 263 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 TGFBRAP1Q8WUH2 860 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 AS3MTQ9HBK9 375 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 PIH1D3Q9NQM4 214 aaKnown RBP17.98■□□□□ 0.47
NFIC-205ENST00000588839 SRRDQ9UH36 339 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 AGTPBP1Q9UPW5 1226 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 FLT1P17948 1338 aa17.98■□□□□ 0.47
NFIC-205ENST00000588839 ECM2O94769 699 aaPredicted RBP17.97■□□□□ 0.47
NFIC-205ENST00000588839 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 BCRP11274 1271 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 CYP7A1P22680 504 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.47
NFIC-205ENST00000588839 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 MAPKAPK5Q8IW41 473 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 CRACR2BQ8N4Y2 399 aaPredicted RBP17.97■□□□□ 0.47
NFIC-205ENST00000588839 PROCA1Q8NCQ7 364 aaPredicted RBP17.97■□□□□ 0.47
NFIC-205ENST00000588839 ZNF280CQ8ND82 737 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 MYPNQ86TC9 1320 aa17.97■□□□□ 0.47
NFIC-205ENST00000588839 USP17L5A8MUK1 530 aa17.96■□□□□ 0.47
NFIC-205ENST00000588839 OSBPP22059 807 aa17.96■□□□□ 0.47
NFIC-205ENST00000588839 SPP2Q13103 211 aa17.96■□□□□ 0.47
NFIC-205ENST00000588839 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
NFIC-205ENST00000588839 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
NFIC-205ENST00000588839 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
NFIC-205ENST00000588839 KIF1BPQ96EK5 621 aa17.96■□□□□ 0.47
NFIC-205ENST00000588839 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
NFIC-205ENST00000588839 ASNSP08243 561 aa17.95■□□□□ 0.46
NFIC-205ENST00000588839 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
NFIC-205ENST00000588839 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
NFIC-205ENST00000588839 MAGEB6Q8N7X4 407 aa17.95■□□□□ 0.46
NFIC-205ENST00000588839 RHPN1Q8TCX5 695 aa17.95■□□□□ 0.46
NFIC-205ENST00000588839 GINM1Q9NU53 330 aa17.95■□□□□ 0.46
NFIC-205ENST00000588839 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
NFIC-205ENST00000588839 ABCB7O75027 752 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
NFIC-205ENST00000588839 CTGFP29279 349 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 GRK4P32298 578 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 USP5P45974 858 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 IL1RAPL2Q9NP60 686 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
NFIC-205ENST00000588839 DOCK3Q8IZD9 2030 aa17.93■□□□□ 0.46
NFIC-205ENST00000588839 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
NFIC-205ENST00000588839 IFIT2P09913 472 aaKnown RBP17.93■□□□□ 0.46
NFIC-205ENST00000588839 HMGCS2P54868 508 aa17.93■□□□□ 0.46
NFIC-205ENST00000588839 ZBTB40Q9NUA8 1239 aa17.93■□□□□ 0.46
NFIC-205ENST00000588839 NAV1Q8NEY1 1877 aa17.92■□□□□ 0.46
NFIC-205ENST00000588839 APBB1O00213 710 aa17.92■□□□□ 0.46
NFIC-205ENST00000588839 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
NFIC-205ENST00000588839 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
NFIC-205ENST00000588839 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms