RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 DDRGK1Q96HY6 314 aa24.13■■□□□ 1.45
ATG4D-208ENST00000588667 MCM9Q9NXL9 1143 aa24.13■■□□□ 1.45
ATG4D-208ENST00000588667 CSADQ9Y600 493 aa24.13■■□□□ 1.45
ATG4D-208ENST00000588667 FAM155AB1AL88 458 aaPredicted RBP24.13■■□□□ 1.45
ATG4D-208ENST00000588667 SDSP20132 328 aa24.13■■□□□ 1.45
ATG4D-208ENST00000588667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.13■■□□□ 1.45
ATG4D-208ENST00000588667 HELLSQ9NRZ9 838 aa24.13■■□□□ 1.45
ATG4D-208ENST00000588667 DOCK1Q14185 1865 aa24.12■■□□□ 1.45
ATG4D-208ENST00000588667 HIP1O00291 1037 aa24.12■■□□□ 1.45
ATG4D-208ENST00000588667 NOGQ13253 232 aa24.12■■□□□ 1.45
ATG4D-208ENST00000588667 TTC6Q86TZ1 520 aa24.12■■□□□ 1.45
ATG4D-208ENST00000588667 METTL16Q86W50 562 aaKnown RBP24.12■■□□□ 1.45
ATG4D-208ENST00000588667 FOXP4Q8IVH2 680 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-208ENST00000588667 SLC10A4Q96EP9 437 aa24.12■■□□□ 1.45
ATG4D-208ENST00000588667 PHF20L1A8MW92 1017 aa24.11■■□□□ 1.45
ATG4D-208ENST00000588667 SLC4A8Q2Y0W8 1093 aa24.11■■□□□ 1.45
ATG4D-208ENST00000588667 FAM227BQ96M60 508 aa24.11■■□□□ 1.45
ATG4D-208ENST00000588667 EHD4Q9H223 541 aa24.11■■□□□ 1.45
ATG4D-208ENST00000588667 LAMB1P07942 1786 aa24.11■■□□□ 1.45
ATG4D-208ENST00000588667 A0A0D9SFI3 127 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 POLR3DP05423 398 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-208ENST00000588667 SLURP2P0DP57 97 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 INPP5BP32019 993 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 NMIQ13287 307 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-208ENST00000588667 GIMAP6Q6P9H5 292 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 CRACR2BQ8N4Y2 399 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-208ENST00000588667 TRIM34Q9BYJ4 488 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 ATAD5Q96QE3 1844 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 FAM196BA6NMK8 535 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 GSG1L2A8MUP6 293 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 MCMDC2Q4G0Z9 681 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 NOL9Q5SY16 702 aaKnown RBP24.1■■□□□ 1.45
ATG4D-208ENST00000588667 JMYQ8N9B5 988 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 ZKSCAN4Q969J2 545 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-208ENST00000588667 ELP3Q9H9T3 547 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 DIAPH3Q9NSV4 1193 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 SERPINB13Q9UIV8 391 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 SNCAIPQ9Y6H5 919 aa24.1■■□□□ 1.45
ATG4D-208ENST00000588667 MAP2K2P36507 400 aa24.09■■□□□ 1.45
ATG4D-208ENST00000588667 AMOTL1Q8IY63 956 aa24.09■■□□□ 1.45
ATG4D-208ENST00000588667 DNAJC18Q9H819 358 aa24.09■■□□□ 1.45
ATG4D-208ENST00000588667 MYH8P13535 1937 aa24.08■■□□□ 1.45
ATG4D-208ENST00000588667 AOC2O75106 756 aa24.08■■□□□ 1.45
ATG4D-208ENST00000588667 PLCD1P51178 756 aa24.08■■□□□ 1.45
ATG4D-208ENST00000588667 SPRYD7Q5W111 196 aa24.08■■□□□ 1.45
ATG4D-208ENST00000588667 CCDC129Q6ZRS4 1044 aa24.08■■□□□ 1.45
ATG4D-208ENST00000588667 PATL2C9JE40 543 aaKnown RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 CTNND1O60716 968 aaKnown RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 CDC45O75419 566 aa24.07■■□□□ 1.44
ATG4D-208ENST00000588667 ZBTB48P10074 688 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 WNK4Q96J92 1243 aa24.07■■□□□ 1.44
ATG4D-208ENST00000588667 EPB41L4AQ9HCS5 686 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 ARPP21Q9UBL0 812 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-208ENST00000588667 SPDYE5A6NIY4 337 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 SCYL3Q8IZE3 742 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 OPTNQ96CV9 577 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 TAOK2Q9UL54 1235 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 USP17L12C9JPN9 530 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 USP17L21D6R901 530 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 APPP05067 770 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 ERO1BQ86YB8 467 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 NACAP1Q9BZK3 213 aa24.06■■□□□ 1.44
ATG4D-208ENST00000588667 EIF5BO60841 1220 aaKnown RBP24.05■■□□□ 1.44
ATG4D-208ENST00000588667 CYP2D6P10635 497 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 TDO2P48775 406 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 GABPAQ06546 454 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 C12orf60Q5U649 245 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 CTR9Q6PD62 1173 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 CWC27Q6UX04 472 aaKnown RBP24.05■■□□□ 1.44
ATG4D-208ENST00000588667 UPF2Q9HAU5 1272 aaKnown RBP24.05■■□□□ 1.44
ATG4D-208ENST00000588667 CCDC171Q6TFL3 1326 aa24.05■■□□□ 1.44
ATG4D-208ENST00000588667 MFAP1P55081 439 aaKnown RBP24.04■■□□□ 1.44
ATG4D-208ENST00000588667 SBK1Q52WX2 424 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 CASC1Q6TDU7 716 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 ZNF589Q86UQ0 364 aaPredicted RBP24.04■■□□□ 1.44
ATG4D-208ENST00000588667 IFNL3Q8IZI9 196 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 ZIC5Q96T25 663 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 PICK1Q9NRD5 415 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 PHIPQ8WWQ0 1821 aa24.04■■□□□ 1.44
ATG4D-208ENST00000588667 GJA5P36382 358 aa24.03■■□□□ 1.44
ATG4D-208ENST00000588667 CAP2P40123 477 aa24.03■■□□□ 1.44
ATG4D-208ENST00000588667 KIF23Q02241 960 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-208ENST00000588667 EVX2Q03828 476 aa24.03■■□□□ 1.44
ATG4D-208ENST00000588667 MKRN3Q13064 507 aaKnown RBP24.03■■□□□ 1.44
ATG4D-208ENST00000588667 CNKSR2Q8WXI2 1034 aa24.03■■□□□ 1.44
ATG4D-208ENST00000588667 OTUD5Q96G74 571 aa24.03■■□□□ 1.44
ATG4D-208ENST00000588667 CYP2D7A0A087X1C5 515 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 FOXP2O15409 715 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 PPATQ06203 517 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 TATDN1Q6P1N9 297 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 REM2Q8IYK8 340 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-208ENST00000588667 NAPBQ9H115 298 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 SWAP70Q9UH65 585 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 MAP2K1Q02750 393 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-208ENST00000588667 PPIL2Q13356 520 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 RRP1BQ14684 758 aaKnown RBP24.02■■□□□ 1.44
ATG4D-208ENST00000588667 VPS53Q5VIR6 699 aa24.02■■□□□ 1.44
ATG4D-208ENST00000588667 PTPRAP18433 802 aa24.01■■□□□ 1.43
ATG4D-208ENST00000588667 CHMLP26374 656 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms