RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 ZNF771Q7L3S4 317 aaPredicted RBP21.3■■□□□ 1
DDX39A-206ENST00000587730 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 AIFM3Q96NN9 605 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 FAM217BQ9NTX9 383 aaPredicted RBP21.3■■□□□ 1
DDX39A-206ENST00000587730 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
DDX39A-206ENST00000587730 ERCC5P28715 1186 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 MDM2Q00987 491 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 LONRF3Q496Y0 759 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 NUTM2AQ8IVF1 878 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 IFNL3Q8IZI9 196 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 STAG1Q8WVM7 1258 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 BMP15O95972 392 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 FGFR2P21802 821 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 TBX2Q13207 712 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 RTN1Q16799 776 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 SPATA5Q8NB90 893 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 SMARCE1Q969G3 411 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 CCDC85AQ96PX6 553 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 FANCLQ9NW38 375 aa21.29■■□□□ 1
DDX39A-206ENST00000587730 ZHX1Q9UKY1 873 aaPredicted RBP21.29■■□□□ 1
DDX39A-206ENST00000587730 TERF2Q15554 542 aa21.28■■□□□ 1
DDX39A-206ENST00000587730 SPECC1LQ69YQ0 1117 aa21.28■■□□□ 1
DDX39A-206ENST00000587730 TRMT112Q9UI30 125 aaKnown RBP21.28■■□□□ 1
DDX39A-206ENST00000587730 COL22A1Q8NFW1 1626 aaPredicted RBP21.27■■□□□ 1
DDX39A-206ENST00000587730 XBP1P17861 261 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 SARSP49591 514 aaKnown RBP21.27■■□□□ 1
DDX39A-206ENST00000587730 EVA1CP58658 441 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 TRIM65Q6PJ69 517 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 REXO1L1PQ8IX06 675 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 DIS3L2Q8IYB7 885 aaKnown RBP21.27■■□□□ 1
DDX39A-206ENST00000587730 BAG1Q99933 345 aaPredicted RBP21.27■■□□□ 1
DDX39A-206ENST00000587730 ZSWIM5Q9P217 1185 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 FBXO2Q9UK22 296 aaPredicted RBP21.27■■□□□ 1
DDX39A-206ENST00000587730 ANKRD36CQ5JPF3 1778 aa21.27■■□□□ 1
DDX39A-206ENST00000587730 ZNF18P17022 549 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 PHKA1P46020 1223 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 WTAPQ15007 396 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 ERCC6LQ2NKX8 1250 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 CLIC6Q96NY7 704 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.27■□□□□ 0.99
DDX39A-206ENST00000587730 WWC3Q9ULE0 1092 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 PPP2R2CQ9Y2T4 447 aa21.27■□□□□ 0.99
DDX39A-206ENST00000587730 SRPRBQ9Y5M8 271 aaKnown RBP21.27■□□□□ 0.99
DDX39A-206ENST00000587730 V9GYY5 206 aaPredicted RBP21.27■□□□□ 0.99
DDX39A-206ENST00000587730 NUTM2BA6NNL0 878 aaPredicted RBP21.26■□□□□ 0.99
DDX39A-206ENST00000587730 NUTM2EB1AL46 878 aaPredicted RBP21.26■□□□□ 0.99
DDX39A-206ENST00000587730 SLFN14P0C7P3 912 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 MORC3Q14149 939 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 ARHGAP29Q52LW3 1261 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 TMCO3Q6UWJ1 677 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
DDX39A-206ENST00000587730 MAN1B1Q9UKM7 699 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 MYH3P11055 1940 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 RTL9Q8NET4 1388 aa21.26■□□□□ 0.99
DDX39A-206ENST00000587730 CCDC66A2RUB6 948 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 MBD4O95243 580 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
DDX39A-206ENST00000587730 TUBB4BP68371 445 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 ISM2Q6H9L7 571 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 STK11IPQ8N1F8 1099 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 DPF2Q92785 391 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 NAA15Q9BXJ9 866 aaKnown RBP21.25■□□□□ 0.99
DDX39A-206ENST00000587730 RXRAP19793 462 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 PIGBQ92521 554 aa21.25■□□□□ 0.99
DDX39A-206ENST00000587730 TADA3O75528 432 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 PLCD1P51178 756 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 TMEM139Q8IV31 216 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 FOXP4Q8IVH2 680 aaPredicted RBP21.24■□□□□ 0.99
DDX39A-206ENST00000587730 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
DDX39A-206ENST00000587730 MAGEB6Q8N7X4 407 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 SPATA20Q8TB22 786 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 EPB41L4AQ9HCS5 686 aaPredicted RBP21.24■□□□□ 0.99
DDX39A-206ENST00000587730 NFE2L3Q9Y4A8 694 aa21.24■□□□□ 0.99
DDX39A-206ENST00000587730 ECM29Q5VYK3 1845 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 SEMA3EO15041 775 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 URI1O94763 535 aaPredicted RBP21.23■□□□□ 0.99
DDX39A-206ENST00000587730 GPTP24298 496 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 CASQ1P31415 396 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
DDX39A-206ENST00000587730 TUBB2AQ13885 445 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 PANX2Q96RD6 677 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 CTAGE1Q96RT6 745 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 PYM1Q9BRP8 204 aaKnown RBP21.23■□□□□ 0.99
DDX39A-206ENST00000587730 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 RNF26Q9BY78 433 aaPredicted RBP21.23■□□□□ 0.99
DDX39A-206ENST00000587730 SENP2Q9HC62 589 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 ASAP1Q9ULH1 1129 aa21.23■□□□□ 0.99
DDX39A-206ENST00000587730 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 BTBD18B2RXH4 712 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 CYP19A1P11511 503 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 TDO2P48775 406 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 TOB1P50616 345 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-206ENST00000587730 CLCN6P51797 869 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 HLFQ16534 295 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 JAKMIP3Q5VZ66 844 aa21.22■□□□□ 0.99
DDX39A-206ENST00000587730 DENND2AQ9ULE3 1009 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms