RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CRACR2BQ8N4Y2 399 aaPredicted RBP22.75■■□□□ 1.23
ATG4D-203ENST00000585752 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 TGFBRAP1Q8WUH2 860 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 PI4KBQ9UBF8 816 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 TTF1Q15361 905 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-203ENST00000585752 HERC5Q9UII4 1024 aaKnown RBP22.74■■□□□ 1.23
ATG4D-203ENST00000585752 COL2A1P02458 1487 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-203ENST00000585752 MYH1P12882 1939 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 GNRH1P01148 92 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 HLA-DOAP06340 250 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 PPP4CP60510 307 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 MAPKAPK5Q8IW41 473 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 PIH1D3Q9NQM4 214 aaKnown RBP22.73■■□□□ 1.23
ATG4D-203ENST00000585752 ZBTB47Q9UFB7 747 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-203ENST00000585752 CPA4Q9UI42 421 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 AFG3L2Q9Y4W6 797 aa22.73■■□□□ 1.23
ATG4D-203ENST00000585752 TRIM75PA6NK02 468 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 FAM196BA6NMK8 535 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 ECM2O94769 699 aaPredicted RBP22.72■■□□□ 1.23
ATG4D-203ENST00000585752 HOXD10P28358 340 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 USP5P45974 858 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 TMED8Q6PL24 325 aaPredicted RBP22.72■■□□□ 1.23
ATG4D-203ENST00000585752 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 TBC1D2Q9BYX2 928 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 AS3MTQ9HBK9 375 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 PCDHB15Q9Y5E8 787 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 PTPRFP10586 1907 aa22.72■■□□□ 1.23
ATG4D-203ENST00000585752 PHIPQ8WWQ0 1821 aa22.71■■□□□ 1.23
ATG4D-203ENST00000585752 A0A0G2JLL6 359 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-203ENST00000585752 FMNL1O95466 1100 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-203ENST00000585752 LACTBP83111 547 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-203ENST00000585752 SLC9C1Q4G0N8 1177 aa22.71■■□□□ 1.23
ATG4D-203ENST00000585752 PRRT2Q7Z6L0 340 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-203ENST00000585752 SLURP2P0DP57 97 aa22.7■■□□□ 1.22
ATG4D-203ENST00000585752 PRMT2P55345 433 aa22.7■■□□□ 1.22
ATG4D-203ENST00000585752 FOXP4Q8IVH2 680 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-203ENST00000585752 TMEM106CQ9BVX2 250 aa22.7■■□□□ 1.22
ATG4D-203ENST00000585752 LRRCC1Q9C099 1032 aa22.7■■□□□ 1.22
ATG4D-203ENST00000585752 FLT1P17948 1338 aa22.69■■□□□ 1.22
ATG4D-203ENST00000585752 C17orf99Q6UX52 265 aa22.69■■□□□ 1.22
ATG4D-203ENST00000585752 ADGRA1Q86SQ6 560 aa22.69■■□□□ 1.22
ATG4D-203ENST00000585752 SMCR8Q8TEV9 937 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-203ENST00000585752 PNMA3Q9UL41 463 aa22.69■■□□□ 1.22
ATG4D-203ENST00000585752 NDUFB9Q9Y6M9 179 aa22.69■■□□□ 1.22
ATG4D-203ENST00000585752 MGAMO43451 1857 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 USP17L5A8MUK1 530 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 CAP2P40123 477 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 PSMC4P43686 418 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 PABPC4Q13310 644 aaKnown RBP eCLIP22.68■■□□□ 1.22
ATG4D-203ENST00000585752 MIGA1Q8NAN2 632 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 DNAJC2Q99543 621 aaKnown RBP22.68■■□□□ 1.22
ATG4D-203ENST00000585752 SAP30BPQ9UHR5 308 aaKnown RBP22.68■■□□□ 1.22
ATG4D-203ENST00000585752 SLC45A1Q9Y2W3 748 aa22.68■■□□□ 1.22
ATG4D-203ENST00000585752 CYP2C8P10632 490 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 DYNLL1P63167 89 aaKnown RBP22.67■■□□□ 1.22
ATG4D-203ENST00000585752 SPP2Q13103 211 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 ZNF280CQ8ND82 737 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-203ENST00000585752 ANTXR1Q9H6X2 564 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 DCTPP1Q9H773 170 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 PALD1Q9ULE6 856 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 PTCH2Q9Y6C5 1203 aa22.67■■□□□ 1.22
ATG4D-203ENST00000585752 ZSWIM8A7E2V4 1837 aa22.66■■□□□ 1.22
ATG4D-203ENST00000585752 NEFLP07196 543 aa22.66■■□□□ 1.22
ATG4D-203ENST00000585752 MOGSQ13724 837 aa22.66■■□□□ 1.22
ATG4D-203ENST00000585752 GPAT2Q6NUI2 795 aa22.66■■□□□ 1.22
ATG4D-203ENST00000585752 ARHGAP39Q9C0H5 1083 aa22.66■■□□□ 1.22
ATG4D-203ENST00000585752 ASNSP08243 561 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 FCGRTP55899 365 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 SLC4A8Q2Y0W8 1093 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 CCDC84Q86UT8 332 aaPredicted RBP22.65■■□□□ 1.22
ATG4D-203ENST00000585752 RAET1EQ8TD07 263 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.65■■□□□ 1.22
ATG4D-203ENST00000585752 ARMC5Q96C12 935 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.65■■□□□ 1.22
ATG4D-203ENST00000585752 AGTPBP1Q9UPW5 1226 aa22.65■■□□□ 1.22
ATG4D-203ENST00000585752 MAGEB6P1A0A0J9YX57 407 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 GOLIM4O00461 696 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 OSBPP22059 807 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-203ENST00000585752 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 TTC6Q86TZ1 520 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 PROCA1Q8NCQ7 364 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-203ENST00000585752 TMOD4Q9NZQ9 345 aa22.64■■□□□ 1.21
ATG4D-203ENST00000585752 GCC1Q96CN9 775 aa22.63■■□□□ 1.21
ATG4D-203ENST00000585752 GINM1Q9NU53 330 aa22.63■■□□□ 1.21
ATG4D-203ENST00000585752 RBBP6Q7Z6E9 1792 aaKnown RBP22.63■■□□□ 1.21
ATG4D-203ENST00000585752 SIPA1L1O43166 1804 aa22.62■■□□□ 1.21
ATG4D-203ENST00000585752 POLR3DP05423 398 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-203ENST00000585752 HMGCS2P54868 508 aa22.62■■□□□ 1.21
ATG4D-203ENST00000585752 CAP1Q01518 475 aa22.62■■□□□ 1.21
ATG4D-203ENST00000585752 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.62■■□□□ 1.211e-6■■■■■ 36.3
ATG4D-203ENST00000585752 SRRDQ9UH36 339 aa22.62■■□□□ 1.21
ATG4D-203ENST00000585752 MYPNQ86TC9 1320 aa22.61■■□□□ 1.21
ATG4D-203ENST00000585752 SMARCA5O60264 1052 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-203ENST00000585752 GDF11O95390 407 aa22.61■■□□□ 1.21
ATG4D-203ENST00000585752 MYCP01106 439 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-203ENST00000585752 GPATCH3Q96I76 525 aa22.61■■□□□ 1.21
ATG4D-203ENST00000585752 TRIM47Q96LD4 638 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms