RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MYH1P12882 1939 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 RNF113AO15541 343 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 DYNLL1P63167 89 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 MAPKAPK5Q8IW41 473 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 OPTNQ96CV9 577 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 PRDM10Q9NQV6 1147 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 SNCAIPQ9Y6H5 919 aa16.63■□□□□ 0.25
PRKCSH-202ENST00000585540 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 PHF20L1A8MW92 1017 aa16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 CLMNQ96JQ2 1002 aa16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
PRKCSH-202ENST00000585540 MBD4O95243 580 aa16.61■□□□□ 0.25
PRKCSH-202ENST00000585540 CRACR2BQ8N4Y2 399 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-202ENST00000585540 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
PRKCSH-202ENST00000585540 FZD1Q9UP38 647 aa16.61■□□□□ 0.25
PRKCSH-202ENST00000585540 CXCL11O14625 94 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 INPP5BP32019 993 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 KCNH4Q9UQ05 1017 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
PRKCSH-202ENST00000585540 HIP1O00291 1037 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 ASNSP08243 561 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 CETPP11597 493 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 CAP2P40123 477 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 PLEKHM2Q8IWE5 1019 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 SWAP70Q9UH65 585 aa16.59■□□□□ 0.25
PRKCSH-202ENST00000585540 FOXN1O15353 648 aa16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 CENPQQ7L2Z9 268 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 ZIC5Q96T25 663 aa16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
PRKCSH-202ENST00000585540 ATAD5Q96QE3 1844 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 GPAA1O43292 621 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 GJA5P36382 358 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 ZMYM1Q5SVZ6 1142 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 TATDN1Q6P1N9 297 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
PRKCSH-202ENST00000585540 PTPRAP18433 802 aa16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 SBK1Q52WX2 424 aa16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 FASTKD5Q7L8L6 764 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-202ENST00000585540 CCL15-CCL14A0A0B4J2E2 113 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 USP17L5A8MUK1 530 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 IRF6O14896 467 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 PDE4AP27815 886 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 GABPAQ06546 454 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 MKRN3Q13064 507 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 CCL15Q16663 113 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
PRKCSH-202ENST00000585540 ROBO3Q96MS0 1386 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 AFG3L2Q9Y4W6 797 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
PRKCSH-202ENST00000585540 MYH8P13535 1937 aa16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 A0A0G2JLL6 359 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 TRPA1O75762 1119 aa16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 PRRT2Q7Z6L0 340 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
PRKCSH-202ENST00000585540 PTPRFP10586 1907 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms