RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
IFT20-214ENST00000585089 LPIN2Q92539 896 aa18.35■□□□□ 0.53
IFT20-214ENST00000585089 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
IFT20-214ENST00000585089 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
IFT20-214ENST00000585089 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
IFT20-214ENST00000585089 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
IFT20-214ENST00000585089 FOSL2P15408 326 aa18.34■□□□□ 0.53
IFT20-214ENST00000585089 HMGCS2P54868 508 aa18.34■□□□□ 0.53
IFT20-214ENST00000585089 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
IFT20-214ENST00000585089 LHX8Q68G74 356 aa18.34■□□□□ 0.53
IFT20-214ENST00000585089 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
IFT20-214ENST00000585089 TNFRSF10AO00220 468 aa18.33■□□□□ 0.52
IFT20-214ENST00000585089 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
IFT20-214ENST00000585089 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
IFT20-214ENST00000585089 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
IFT20-214ENST00000585089 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
IFT20-214ENST00000585089 LTBP2Q14767 1821 aa18.33■□□□□ 0.52
IFT20-214ENST00000585089 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 UTYO14607 1347 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 TBC1D12O60347 775 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 PICALMQ13492 652 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 CCAR1Q8IX12 1150 aaKnown RBP18.32■□□□□ 0.52
IFT20-214ENST00000585089 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
IFT20-214ENST00000585089 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
IFT20-214ENST00000585089 GAKO14976 1311 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 RGS2P41220 211 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
IFT20-214ENST00000585089 SHHQ15465 462 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 TJAP1Q5JTD0 557 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 GPRC5AQ8NFJ5 357 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.31■□□□□ 0.52
IFT20-214ENST00000585089 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 VCANP13611 3396 aa18.31■□□□□ 0.52
IFT20-214ENST00000585089 MAPK4P31152 587 aa18.3■□□□□ 0.52
IFT20-214ENST00000585089 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
IFT20-214ENST00000585089 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
IFT20-214ENST00000585089 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
IFT20-214ENST00000585089 TTYH1Q9H313 450 aaPredicted RBP18.3■□□□□ 0.52
IFT20-214ENST00000585089 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
IFT20-214ENST00000585089 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
IFT20-214ENST00000585089 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
IFT20-214ENST00000585089 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
IFT20-214ENST00000585089 SEMA3EO15041 775 aa18.29■□□□□ 0.52
IFT20-214ENST00000585089 ATN1P54259 1190 aaPredicted RBP18.29■□□□□ 0.52
IFT20-214ENST00000585089 CCL14Q16627 93 aa18.29■□□□□ 0.52
IFT20-214ENST00000585089 DZIP1Q86YF9 867 aaKnown RBP18.29■□□□□ 0.52
IFT20-214ENST00000585089 APBA2Q99767 749 aa18.29■□□□□ 0.52
IFT20-214ENST00000585089 SPTBN5Q9NRC6 3674 aaKnown RBP18.28■□□□□ 0.52
IFT20-214ENST00000585089 EYA2O00167 538 aa18.28■□□□□ 0.52
IFT20-214ENST00000585089 RTP1P59025 263 aa18.28■□□□□ 0.52
IFT20-214ENST00000585089 USP6NLQ92738 828 aa18.28■□□□□ 0.52
IFT20-214ENST00000585089 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
IFT20-214ENST00000585089 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
IFT20-214ENST00000585089 TMOD4Q9NZQ9 345 aa18.28■□□□□ 0.52
IFT20-214ENST00000585089 FAM196BA6NMK8 535 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 PLA2G5P39877 138 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 CAP2P40123 477 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 BTDP43251 543 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 MFSD14CQ5VZR4 134 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 FAM122AQ96E09 287 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 RAPGEFL1Q9UHV5 662 aa18.27■□□□□ 0.52
IFT20-214ENST00000585089 MSCO60682 206 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 HOXA7P31268 230 aaPredicted RBP18.26■□□□□ 0.51
IFT20-214ENST00000585089 HERVK_113P62684 666 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 MORN1Q5T089 497 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 GPR142Q7Z601 462 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 FAM163AQ96GL9 167 aaPredicted RBP18.26■□□□□ 0.51
IFT20-214ENST00000585089 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 ATP11BQ9Y2G3 1177 aa18.26■□□□□ 0.51
IFT20-214ENST00000585089 TMEM265A0A087WTH1 108 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 DNM1LO00429 736 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 PEX10O60683 326 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
IFT20-214ENST00000585089 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 ERVK-24P63145 666 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 PRDM5Q9NQX1 630 aaPredicted RBP18.25■□□□□ 0.51
IFT20-214ENST00000585089 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
IFT20-214ENST00000585089 RLFQ13129 1914 aa18.25■□□□□ 0.51
IFT20-214ENST00000585089 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
IFT20-214ENST00000585089 GLRX3O76003 335 aaKnown RBP18.24■□□□□ 0.51
IFT20-214ENST00000585089 CNGA1P29973 690 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 MTMR2Q13614 643 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
IFT20-214ENST00000585089 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
IFT20-214ENST00000585089 GTF3C2Q8WUA4 911 aaPredicted RBP18.24■□□□□ 0.51
IFT20-214ENST00000585089 LPAR1Q92633 364 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 WDR18Q9BV38 432 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
IFT20-214ENST00000585089 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
IFT20-214ENST00000585089 EYSQ5T1H1 3165 aa18.23■□□□□ 0.51
IFT20-214ENST00000585089 PRUNE2Q8WUY3 3088 aa18.23■□□□□ 0.51
IFT20-214ENST00000585089 PHKA1P46020 1223 aa18.23■□□□□ 0.51
IFT20-214ENST00000585089 BACE1P56817 501 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms