RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 DDTLA6NHG4 134 aaPredicted RBP30.21■■■□□ 2.43
TSEN54-209ENST00000583454 ZNF333Q96JL9 665 aa30.21■■■□□ 2.43
TSEN54-209ENST00000583454 ECHDC1Q9NTX5 307 aa30.21■■■□□ 2.43
TSEN54-209ENST00000583454 MGAMO43451 1857 aa30.21■■■□□ 2.43
TSEN54-209ENST00000583454 MAST2Q6P0Q8 1798 aa30.2■■■□□ 2.43
TSEN54-209ENST00000583454 CTGFP29279 349 aa30.2■■■□□ 2.43
TSEN54-209ENST00000583454 ANKRD45Q5TZF3 282 aa30.2■■■□□ 2.43
TSEN54-209ENST00000583454 CDK5RAP2Q96SN8 1893 aa30.19■■■□□ 2.42
TSEN54-209ENST00000583454 ARHGEF6Q15052 776 aa30.19■■■□□ 2.42
TSEN54-209ENST00000583454 HAUS7Q99871 368 aa30.19■■■□□ 2.42
TSEN54-209ENST00000583454 BOLA2Q9H3K6 86 aa30.19■■■□□ 2.42
TSEN54-209ENST00000583454 ATAD5Q96QE3 1844 aa30.18■■■□□ 2.42
TSEN54-209ENST00000583454 PDHXO00330 501 aa30.18■■■□□ 2.42
TSEN54-209ENST00000583454 TTF1Q15361 905 aaPredicted RBP30.18■■■□□ 2.42
TSEN54-209ENST00000583454 NAA16Q6N069 864 aaPredicted RBP30.18■■■□□ 2.42
TSEN54-209ENST00000583454 GPAT2Q6NUI2 795 aa30.18■■■□□ 2.42
TSEN54-209ENST00000583454 TMED8Q6PL24 325 aaPredicted RBP30.17■■■□□ 2.42
TSEN54-209ENST00000583454 SCYL3Q8IZE3 742 aa30.17■■■□□ 2.42
TSEN54-209ENST00000583454 CPA4Q9UI42 421 aa30.17■■■□□ 2.42
TSEN54-209ENST00000583454 SIPA1L1O43166 1804 aa30.17■■■□□ 2.42
TSEN54-209ENST00000583454 GOLIM4O00461 696 aa30.16■■■□□ 2.42
TSEN54-209ENST00000583454 CXCL11O14625 94 aa30.16■■■□□ 2.42
TSEN54-209ENST00000583454 IDH1O75874 414 aaKnown RBP30.16■■■□□ 2.42
TSEN54-209ENST00000583454 PICALMQ13492 652 aa30.16■■■□□ 2.42
TSEN54-209ENST00000583454 GPATCH3Q96I76 525 aa30.16■■■□□ 2.42
TSEN54-209ENST00000583454 DNAJC2Q99543 621 aaKnown RBP30.16■■■□□ 2.42
TSEN54-209ENST00000583454 FOCADQ5VW36 1801 aa30.15■■■□□ 2.42
TSEN54-209ENST00000583454 COL2A1P02458 1487 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 NPM3O75607 178 aaKnown RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 MAP4K4O95819 1239 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 PTPRAP18433 802 aa30.15■■■□□ 2.42
TSEN54-209ENST00000583454 EN2P19622 333 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 MAP3K12Q12852 859 aa30.15■■■□□ 2.42
TSEN54-209ENST00000583454 SLC9C1Q4G0N8 1177 aa30.15■■■□□ 2.42
TSEN54-209ENST00000583454 OTUD7AQ8TE49 926 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 PAG1Q9NWQ8 432 aa30.15■■■□□ 2.42
TSEN54-209ENST00000583454 ZBTB47Q9UFB7 747 aaPredicted RBP30.15■■■□□ 2.42
TSEN54-209ENST00000583454 PPP4CP60510 307 aa30.14■■■□□ 2.42
TSEN54-209ENST00000583454 ZSCAN29Q8IWY8 852 aaPredicted RBP30.14■■■□□ 2.42
TSEN54-209ENST00000583454 EDC3Q96F86 508 aaKnown RBP30.14■■■□□ 2.42
TSEN54-209ENST00000583454 SALL3Q9BXA9 1300 aa30.14■■■□□ 2.42
TSEN54-209ENST00000583454 A0A0G2JLL6 359 aaPredicted RBP30.13■■■□□ 2.41
TSEN54-209ENST00000583454 PRRT2Q7Z6L0 340 aaPredicted RBP30.13■■■□□ 2.41
TSEN54-209ENST00000583454 ADGRA1Q86SQ6 560 aa30.13■■■□□ 2.41
TSEN54-209ENST00000583454 TRIM47Q96LD4 638 aa30.13■■■□□ 2.41
TSEN54-209ENST00000583454 AFG3L2Q9Y4W6 797 aa30.13■■■□□ 2.41
TSEN54-209ENST00000583454 ZHX2Q9Y6X8 837 aa30.13■■■□□ 2.41
TSEN54-209ENST00000583454 TTC41PQ6P2S7 1318 aa30.13■■■□□ 2.41
TSEN54-209ENST00000583454 GNRH1P01148 92 aa30.12■■■□□ 2.41
TSEN54-209ENST00000583454 KIF22Q14807 665 aa30.12■■■□□ 2.41
TSEN54-209ENST00000583454 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.12■■■□□ 2.41
TSEN54-209ENST00000583454 LOC285556D6RIA3 1793 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 BCRP11274 1271 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 CYP7A1P22680 504 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 TSHZ3Q63HK5 1081 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 MAGEB6Q8N7X4 407 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 SH3TC2Q8TF17 1288 aa30.11■■■□□ 2.41
TSEN54-209ENST00000583454 TBC1D12O60347 775 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 CTNND1O60716 968 aaKnown RBP30.1■■■□□ 2.41
TSEN54-209ENST00000583454 BAG3O95817 575 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 CYP2C8P10632 490 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 MX1P20591 662 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 NUCB1Q02818 461 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 PICK1Q9NRD5 415 aa30.1■■■□□ 2.41
TSEN54-209ENST00000583454 ECM2O94769 699 aaPredicted RBP30.09■■■□□ 2.41
TSEN54-209ENST00000583454 PSMC4P43686 418 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 PRMT2P55345 433 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 B4GALNT3Q6L9W6 998 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 NBPF11Q86T75 865 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 PI4K2BQ8TCG2 481 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 NOL10Q9BSC4 688 aaKnown RBP30.09■■■□□ 2.41
TSEN54-209ENST00000583454 STAP2Q9UGK3 403 aa30.09■■■□□ 2.41
TSEN54-209ENST00000583454 FAM196BA6NMK8 535 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 PDE6AP16499 860 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 SLC9C2Q5TAH2 1124 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 CCDC84Q86UT8 332 aaPredicted RBP30.08■■■□□ 2.41
TSEN54-209ENST00000583454 PARK7Q99497 189 aaKnown RBP30.08■■■□□ 2.41
TSEN54-209ENST00000583454 LNPKQ9C0E8 428 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 OSBPL5Q9H0X9 879 aaPredicted RBP30.08■■■□□ 2.41
TSEN54-209ENST00000583454 AATFQ9NY61 560 aaKnown RBP eCLIP30.08■■■□□ 2.41
TSEN54-209ENST00000583454 SRRDQ9UH36 339 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 CEP290O15078 2479 aa30.08■■■□□ 2.41
TSEN54-209ENST00000583454 ERC2O15083 957 aa30.07■■■□□ 2.4
TSEN54-209ENST00000583454 GLRX3O76003 335 aaKnown RBP30.07■■■□□ 2.4
TSEN54-209ENST00000583454 PLCG2P16885 1265 aa30.07■■■□□ 2.4
TSEN54-209ENST00000583454 OSBPP22059 807 aa30.07■■■□□ 2.4
TSEN54-209ENST00000583454 CHD1LQ86WJ1 897 aa30.07■■■□□ 2.4
TSEN54-209ENST00000583454 SH3RF3Q8TEJ3 882 aaPredicted RBP30.07■■■□□ 2.4
TSEN54-209ENST00000583454 TMEM106CQ9BVX2 250 aa30.07■■■□□ 2.4
TSEN54-209ENST00000583454 FASTKD5Q7L8L6 764 aaKnown RBP30.06■■■□□ 2.4
TSEN54-209ENST00000583454 DOCK3Q8IZD9 2030 aa30.05■■■□□ 2.4
TSEN54-209ENST00000583454 TCRBV5S4A2TA0A5A2 114 aa30.05■■■□□ 2.4
TSEN54-209ENST00000583454 RRP1BQ14684 758 aaKnown RBP30.05■■■□□ 2.4
TSEN54-209ENST00000583454 TEX11Q8IYF3 940 aa30.05■■■□□ 2.4
TSEN54-209ENST00000583454 SLC45A1Q9Y2W3 748 aa30.05■■■□□ 2.4
TSEN54-209ENST00000583454 MYH7P12883 1935 aa30.04■■■□□ 2.4
TSEN54-209ENST00000583454 PDE1AP54750 535 aa30.04■■■□□ 2.4
TSEN54-209ENST00000583454 CERS3Q8IU89 383 aa30.04■■■□□ 2.4
TSEN54-209ENST00000583454 ZNF532Q9HCE3 1301 aa30.03■■■□□ 2.4
TSEN54-209ENST00000583454 MYCP01106 439 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms