RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 TBC1D2Q9BYX2 928 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-215ENST00000583328 MTMR10Q9NXD2 777 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 OGDHLQ9ULD0 1010 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 RFX7Q2KHR2 1363 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 ZBTB22O15209 634 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 TIMM10P62072 90 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
TOP3A-215ENST00000583328 PA2G4Q9UQ80 394 aaKnown RBP15.25■□□□□ 0.03
TOP3A-215ENST00000583328 RHBDL3P58872 404 aa15.24■□□□□ 0.03
TOP3A-215ENST00000583328 IRX3P78415 501 aaPredicted RBP15.24■□□□□ 0.03
TOP3A-215ENST00000583328 TRIB2Q92519 343 aa15.24■□□□□ 0.03
TOP3A-215ENST00000583328 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
TOP3A-215ENST00000583328 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
TOP3A-215ENST00000583328 LDHCP07864 332 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
TOP3A-215ENST00000583328 CAP2P40123 477 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 MECOMQ03112 1051 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 SH3D19Q5HYK7 790 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 MORF4L1Q9UBU8 362 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
TOP3A-215ENST00000583328 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
TOP3A-215ENST00000583328 CUL9Q8IWT3 2517 aa15.22■□□□□ 0.03
TOP3A-215ENST00000583328 PDS5AQ29RF7 1337 aaKnown RBP15.22■□□□□ 0.03
TOP3A-215ENST00000583328 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
TOP3A-215ENST00000583328 GSTO1P78417 241 aa15.22■□□□□ 0.03
TOP3A-215ENST00000583328 P2RX7Q99572 595 aaKnown RBP15.22■□□□□ 0.03
TOP3A-215ENST00000583328 TMOD4Q9NZQ9 345 aa15.22■□□□□ 0.03
TOP3A-215ENST00000583328 PFASO15067 1338 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
TOP3A-215ENST00000583328 PDE3AQ14432 1141 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 RRP1BQ14684 758 aaKnown RBP15.21■□□□□ 0.03
TOP3A-215ENST00000583328 MVPQ14764 893 aaKnown RBP15.21■□□□□ 0.03
TOP3A-215ENST00000583328 MAP3K21Q5TCX8 1036 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
TOP3A-215ENST00000583328 TRMT44Q8IYL2 757 aaKnown RBP15.21■□□□□ 0.03
TOP3A-215ENST00000583328 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 XAGE2Q96GT9 111 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 COPRSQ9NQ92 184 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
TOP3A-215ENST00000583328 A0A1B0GUL7 405 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-215ENST00000583328 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-215ENST00000583328 MTMR2Q13614 643 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 MIER1Q8N108 512 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 ZNF384Q8TF68 577 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 COL25A1Q9BXS0 654 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-215ENST00000583328 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 HERC5Q9UII4 1024 aaKnown RBP15.2■□□□□ 0.02
TOP3A-215ENST00000583328 COL6A3P12111 3177 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 A0A0C4DFX4 3053 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
TOP3A-215ENST00000583328 ZNF521Q96K83 1311 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 MYH13Q9UKX3 1938 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 E9PSI1 815 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 PEX10O60683 326 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 MAPK4P31152 587 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-215ENST00000583328 BACE1P56817 501 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 CACNB2Q08289 660 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-215ENST00000583328 LRRC26Q2I0M4 334 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 NSUN4Q96CB9 384 aaKnown RBP15.19■□□□□ 0.02
TOP3A-215ENST00000583328 NEUROD6Q96NK8 337 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 SMC4Q9NTJ3 1288 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 MYH2Q9UKX2 1941 aa15.19■□□□□ 0.02
TOP3A-215ENST00000583328 DOCK1Q14185 1865 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 COL6A1P12109 1028 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-215ENST00000583328 RGS2P41220 211 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 HERVK_113P62684 666 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 TFCP2Q12800 502 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 GORABQ5T7V8 394 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
TOP3A-215ENST00000583328 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
TOP3A-215ENST00000583328 HMG20BQ9P0W2 317 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 PI4KBQ9UBF8 816 aa15.18■□□□□ 0.02
TOP3A-215ENST00000583328 C19orf81C9J6K1 198 aa15.17■□□□□ 0.02
TOP3A-215ENST00000583328 ASNSP08243 561 aa15.17■□□□□ 0.02
TOP3A-215ENST00000583328 Q3C1V9 767 aa15.17■□□□□ 0.02
TOP3A-215ENST00000583328 LHX8Q68G74 356 aa15.17■□□□□ 0.02
TOP3A-215ENST00000583328 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
TOP3A-215ENST00000583328 LBHD1Q9BQE6 289 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-215ENST00000583328 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
TOP3A-215ENST00000583328 PAGR1Q9BTK6 254 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms