RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 CACNB2Q08289 660 aaPredicted RBP11.77□□□□□ -0.53
TVP23C-209ENST00000583206 SPP2Q13103 211 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 ATG9AQ7Z3C6 839 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 LPIN2Q92539 896 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
TVP23C-209ENST00000583206 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
TVP23C-209ENST00000583206 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
TVP23C-209ENST00000583206 LDHBP07195 334 aaKnown RBP11.76□□□□□ -0.53
TVP23C-209ENST00000583206 CCND3P30281 292 aaPredicted RBP11.76□□□□□ -0.53
TVP23C-209ENST00000583206 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
TVP23C-209ENST00000583206 SLC4A10Q6U841 1118 aa11.76□□□□□ -0.53
TVP23C-209ENST00000583206 ZNF280CQ8ND82 737 aa11.76□□□□□ -0.53
TVP23C-209ENST00000583206 MAFAQ8NHW3 353 aaPredicted RBP11.76□□□□□ -0.53
TVP23C-209ENST00000583206 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
TVP23C-209ENST00000583206 TXNRD2Q9NNW7 524 aa11.76□□□□□ -0.53
TVP23C-209ENST00000583206 EYA2O00167 538 aa11.75□□□□□ -0.53
TVP23C-209ENST00000583206 HMGCS2P54868 508 aa11.75□□□□□ -0.53
TVP23C-209ENST00000583206 Q3C1V9 767 aa11.75□□□□□ -0.53
TVP23C-209ENST00000583206 MORN1Q5T089 497 aa11.75□□□□□ -0.53
TVP23C-209ENST00000583206 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
TVP23C-209ENST00000583206 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
TVP23C-209ENST00000583206 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
TVP23C-209ENST00000583206 SLC5A1P13866 664 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 COL9A1P20849 921 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 HOXA7P31268 230 aaPredicted RBP11.74□□□□□ -0.53
TVP23C-209ENST00000583206 RHBDL3P58872 404 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 SHHQ15465 462 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 CCL14Q16627 93 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
TVP23C-209ENST00000583206 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
TVP23C-209ENST00000583206 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
TVP23C-209ENST00000583206 ZEB1P37275 1124 aaPredicted RBP11.73□□□□□ -0.53
TVP23C-209ENST00000583206 PHKA1P46020 1223 aa11.73□□□□□ -0.53
TVP23C-209ENST00000583206 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
TVP23C-209ENST00000583206 C9orf50Q5SZB4 431 aa11.73□□□□□ -0.53
TVP23C-209ENST00000583206 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
TVP23C-209ENST00000583206 RAPGEFL1Q9UHV5 662 aa11.73□□□□□ -0.53
TVP23C-209ENST00000583206 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 GPR75-ASB3A0A0A6YYF3 556 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 IGHA2P01877 340 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 CAP2P40123 477 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 JAG1P78504 1218 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
TVP23C-209ENST00000583206 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
TVP23C-209ENST00000583206 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 SOCS4Q8WXH5 440 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 LBHD1Q9BQE6 289 aaPredicted RBP11.72□□□□□ -0.53
TVP23C-209ENST00000583206 WDR18Q9BV38 432 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 SENP6Q9GZR1 1112 aaPredicted RBP11.72□□□□□ -0.53
TVP23C-209ENST00000583206 PORCNQ9H237 461 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
TVP23C-209ENST00000583206 SEMA3EO15041 775 aa11.71□□□□□ -0.53
TVP23C-209ENST00000583206 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
TVP23C-209ENST00000583206 BTDP43251 543 aa11.71□□□□□ -0.53
TVP23C-209ENST00000583206 HERVK_113P62684 666 aa11.71□□□□□ -0.53
TVP23C-209ENST00000583206 PICALMQ13492 652 aa11.71□□□□□ -0.53
TVP23C-209ENST00000583206 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
TVP23C-209ENST00000583206 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
TVP23C-209ENST00000583206 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.53
TVP23C-209ENST00000583206 USP17L5A8MUK1 530 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 ADORA1P30542 326 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 MAPK4P31152 587 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
TVP23C-209ENST00000583206 BACE1P56817 501 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 SMAD3P84022 425 aaKnown RBP11.7□□□□□ -0.54
TVP23C-209ENST00000583206 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 GPR142Q7Z601 462 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
TVP23C-209ENST00000583206 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
TVP23C-209ENST00000583206 MROH7-TTC4A0A0A0MT08 1334 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 MYH2Q9UKX2 1941 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 RGS2P41220 211 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 RTP1P59025 263 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 ERVK-24P63145 666 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 MTMR2Q13614 643 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 RASGRF1Q13972 1273 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 CCDC102BQ68D86 513 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 LPAR1Q92633 364 aa11.69□□□□□ -0.54
TVP23C-209ENST00000583206 PDS5AQ29RF7 1337 aaKnown RBP11.68□□□□□ -0.54
TVP23C-209ENST00000583206 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 CNMDO75829 334 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 CIAO1O76071 339 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
TVP23C-209ENST00000583206 MECOMQ03112 1051 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
TVP23C-209ENST00000583206 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
TVP23C-209ENST00000583206 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
TVP23C-209ENST00000583206 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
TVP23C-209ENST00000583206 TRPV1Q8NER1 839 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms