RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SLC5A6Q9Y289 635 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 U3KQE9 123 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 CDK8P49336 464 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 LIG3P49916 1009 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 OXCT1P55809 520 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 TAGLNQ01995 201 aaKnown RBP7.37□□□□□ -1.23
COPS3-217ENST00000583160 BNIP3Q12983 259 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 TMC4Q7Z404 712 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
COPS3-217ENST00000583160 PAK6Q9NQU5 681 aaPredicted RBP7.37□□□□□ -1.23
COPS3-217ENST00000583160 CTSHP09668 335 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 SEPT6Q14141 434 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
COPS3-217ENST00000583160 WIPI1Q5MNZ9 446 aaPredicted RBP7.36□□□□□ -1.23
COPS3-217ENST00000583160 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 STK11IPQ8N1F8 1099 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 AGBL5Q8NDL9 886 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 HEXIM2Q96MH2 286 aaKnown RBP7.36□□□□□ -1.23
COPS3-217ENST00000583160 WNT10AQ9GZT5 417 aa7.36□□□□□ -1.23
COPS3-217ENST00000583160 ERCC3P19447 782 aa7.35□□□□□ -1.23
COPS3-217ENST00000583160 ZNF574Q6ZN55 896 aaPredicted RBP7.35□□□□□ -1.23
COPS3-217ENST00000583160 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
COPS3-217ENST00000583160 MISP3Q96FF7 219 aa7.35□□□□□ -1.23
COPS3-217ENST00000583160 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
COPS3-217ENST00000583160 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
COPS3-217ENST00000583160 USP31Q70CQ4 1352 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 LRIG2O94898 1065 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 CEACAM5P06731 702 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 RLBP1P12271 317 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
COPS3-217ENST00000583160 ETF1P62495 437 aaKnown RBP7.34□□□□□ -1.23
COPS3-217ENST00000583160 IFI16Q16666 785 aaKnown RBP7.34□□□□□ -1.23
COPS3-217ENST00000583160 ARMCX6Q7L4S7 300 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 NOC4LQ9BVI4 516 aaKnown RBP7.34□□□□□ -1.23
COPS3-217ENST00000583160 GTF2IRD1Q9UHL9 959 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
COPS3-217ENST00000583160 SORBS3O60504 671 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 EOMESO95936 686 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
COPS3-217ENST00000583160 ITIH2P19823 946 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 PRKCQQ04759 706 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 SLBPQ14493 270 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPS3-217ENST00000583160 WFDC3Q8IUB2 231 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 MIR1-1HGQ9H1L0 117 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 TLR6Q9Y2C9 796 aa7.33□□□□□ -1.24
COPS3-217ENST00000583160 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS3-217ENST00000583160 GFRA2O00451 464 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 PAX4O43316 350 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 CD8BP10966 210 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 NKG7Q16617 165 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 AOC3Q16853 763 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 HID1Q8IV36 788 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 JARID2Q92833 1246 aaPredicted RBP7.32□□□□□ -1.24
COPS3-217ENST00000583160 HRASLS5Q96KN8 279 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 FOXQ1Q9C009 403 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
COPS3-217ENST00000583160 SLITRK5O94991 958 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 GRK4P32298 578 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 TNKS2Q9H2K2 1166 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 VTI1BQ9UEU0 232 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
COPS3-217ENST00000583160 CAP2P40123 477 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 CD96P40200 585 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 TSNAXIP1Q2TAA8 658 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 MFSD2AQ8NA29 543 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 PHC3Q8NDX5 983 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 CRELD1Q96HD1 420 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 MIPEPQ99797 713 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 PRDM5Q9NQX1 630 aaPredicted RBP7.3□□□□□ -1.24
COPS3-217ENST00000583160 TACC3Q9Y6A5 838 aa7.3□□□□□ -1.24
COPS3-217ENST00000583160 F6X3S4 739 aa7.29□□□□□ -1.24
COPS3-217ENST00000583160 NKPD1Q17RQ9 610 aa7.29□□□□□ -1.24
COPS3-217ENST00000583160 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
COPS3-217ENST00000583160 TPX2Q9ULW0 747 aaKnown RBP7.29□□□□□ -1.24
COPS3-217ENST00000583160 GNAT3A8MTJ3 354 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 CST3P01034 146 aaPredicted RBP7.28□□□□□ -1.24
COPS3-217ENST00000583160 PGRP06401 933 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 RPL6Q02878 288 aaKnown RBP7.28□□□□□ -1.24
COPS3-217ENST00000583160 ZNF792Q3KQV3 632 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 PRAMEF13Q5VWM6 474 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 RIN3Q8TB24 985 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 XAGE3Q8WTP9 111 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 MAPK8IP1Q9UQF2 711 aa7.28□□□□□ -1.24
COPS3-217ENST00000583160 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
COPS3-217ENST00000583160 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
COPS3-217ENST00000583160 FUT4P22083 530 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 ITGAEP38570 1179 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 LETMD1Q6P1Q0 360 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 TJP2Q9UDY2 1190 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 RNF114Q9Y508 228 aa7.27□□□□□ -1.25
COPS3-217ENST00000583160 PRR33A8MZF0 331 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms