RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	NEK9	Q8TD19	979 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	POLK	Q9UBT6	870 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	PCDHA11	Q9Y5I1	949 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	DMXL2	Q8TDJ6	3036 aa		6.87	□□□□□ -1.31
MSI2-216	ENST00000582772	FANCM	Q8IYD8	2048 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	TNKS	O95271	1327 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	CCND3	P30281	292 aa	Predicted RBP	6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	RSPO4	Q2I0M5	234 aa	Predicted RBP	6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	AEBP1	Q8IUX7	1158 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	SEMA4A	Q9H3S1	761 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	FAM50B	Q9Y247	325 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	SPTA1	P02549	2419 aa		6.86	□□□□□ -1.31
MSI2-216	ENST00000582772	RELN	P78509	3460 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	COL11A1	P12107	1806 aa	Predicted RBP	6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	ABCA12	Q86UK0	2595 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	IGF2R	P11717	2491 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	EPOP	A6NHQ4	379 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	MYO1B	O43795	1136 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	LPXN	O60711	386 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	KDM4A	O75164	1064 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	PROS1	P07225	676 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	KCNA5	P22460	613 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	GPT	P24298	496 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	TLE2	Q04725	743 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	PPIG	Q13427	754 aa	Known RBP eCLIP	6.85	□□□□□ -1.31	7e-17	■■■□□ 15
MSI2-216	ENST00000582772	TNFAIP1	Q13829	316 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	COL9A3	Q14050	684 aa	Predicted RBP	6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	RNF135	Q8IUD6	432 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	PIK3R5	Q8WYR1	880 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	ASIC4	Q96FT7	647 aa		6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	POP1	Q99575	1024 aa	Known RBP	6.85	□□□□□ -1.31
MSI2-216	ENST00000582772	PIEZO2	Q9H5I5	2752 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	SPDYE2B	A6NHP3	402 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	RFXAP	O00287	272 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	UFL1	O94874	794 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	SPDYE6	P0CI01	402 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	ATXN1	P54253	815 aa	Known RBP	6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	SHC2	P98077	582 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	ZXDA	P98168	799 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	SIGLEC14	Q08ET2	396 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	MAP2K5	Q13163	448 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	DLGAP5	Q15398	846 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	MFSD5	Q6N075	450 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	CELF1	Q92879	486 aa	Known RBP	6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	MXD3	Q9BW11	206 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	MTIF3	Q9H2K0	278 aa	Known RBP	6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	ANKFY1	Q9P2R3	1169 aa		6.84	□□□□□ -1.31
MSI2-216	ENST00000582772	ROCK2	O75116	1388 aa	Known RBP	6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	MED23	Q9ULK4	1368 aa		6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	TIMP1	P01033	207 aa		6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	UTP14A	Q9BVJ6	771 aa	Known RBP	6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	BSDC1	Q9NW68	430 aa	Predicted RBP	6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	DDX20	Q9UHI6	824 aa	Known RBP	6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	GGA1	Q9UJY5	639 aa		6.83	□□□□□ -1.32
MSI2-216	ENST00000582772	ITPR3	Q14573	2671 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	LMNA	P02545	664 aa	Known RBP	6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	SLC4A2	P04920	1241 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	ZKSCAN1	P17029	563 aa	Predicted RBP	6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	CACNB1	Q02641	598 aa	Predicted RBP	6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	GRB10	Q13322	594 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	NCBP3	Q53F19	620 aa	Known RBP	6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	GIGYF2	Q6Y7W6	1299 aa	Known RBP	6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	KIAA0825	Q8IV33	1275 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	CDAN1	Q8IWY9	1227 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	SLC44A5	Q8NCS7	719 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	SOCS4	Q8WXH5	440 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	TOX2	Q96NM4	488 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	CACNA2D2	Q9NY47	1150 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	ANGPTL2	Q9UKU9	493 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	FREM2	Q5SZK8	3169 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	LOC285556	D6RIA3	1793 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	FBN3	Q75N90	2809 aa		6.82	□□□□□ -1.32
MSI2-216	ENST00000582772	UTY	O14607	1347 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	CLRN2	A0PK11	232 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	CXCL11	O14625	94 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	KALRN	O60229	2985 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	SNRPA1	P09661	255 aa	Known RBP	6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	COL19A1	Q14993	1142 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	SOWAHC	Q53LP3	525 aa	Predicted RBP	6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	ZNF365	Q70YC5	407 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	ANKRD33	Q7Z3H0	272 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	KDF1	Q8NAX2	398 aa	Predicted RBP	6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	ARRDC4	Q8NCT1	418 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	SMCR8	Q8TEV9	937 aa	Predicted RBP	6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	USP6NL	Q92738	828 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	WRNIP1	Q96S55	665 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	RTKN	Q9BST9	563 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	VEZT	Q9HBM0	779 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	TBX21	Q9UL17	535 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	ZMIZ1	Q9ULJ6	1067 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	LHX6	Q9UPM6	363 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	CFAP46	Q8IYW2	2715 aa		6.81	□□□□□ -1.32
MSI2-216	ENST00000582772	SI	P14410	1827 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772		A0A0G2JLL6	359 aa	Predicted RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	KBTBD13	C9JR72	458 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	RING1	Q06587	406 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	SPTAN1	Q13813	2472 aa	Known RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	SF3B3	Q15393	1217 aa	Known RBP	6.8	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms