RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TBC1D12O60347 775 aa17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 LDHBP07195 334 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 CYP2B6P20813 491 aa17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 CACNB2Q08289 660 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 GAKO14976 1311 aa17.38■□□□□ 0.37
CSNK1D-219ENST00000581660 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 ZSCAN29Q8IWY8 852 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 MYLIPQ8WY64 445 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 USP6NLQ92738 828 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 FRMPD3Q5JV73 1810 aa17.37■□□□□ 0.37
CSNK1D-219ENST00000581660 BDP1A6H8Y1 2624 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 ZBTB22O15209 634 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 SLC5A1P13866 664 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 SPP2Q13103 211 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 SH3D19Q5HYK7 790 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 LPIN2Q92539 896 aa17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-219ENST00000581660 TNFRSF10AO00220 468 aa17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 HMGCS2P54868 508 aa17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 TJAP1Q5JTD0 557 aa17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 OSBPL5Q9H0X9 879 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 MYH2Q9UKX2 1941 aa17.35■□□□□ 0.37
CSNK1D-219ENST00000581660 FOSL2P15408 326 aa17.34■□□□□ 0.37
CSNK1D-219ENST00000581660 PLA2G5P39877 138 aa17.34■□□□□ 0.37
CSNK1D-219ENST00000581660 SHHQ15465 462 aa17.34■□□□□ 0.37
CSNK1D-219ENST00000581660 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
CSNK1D-219ENST00000581660 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 SEMA3EO15041 775 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 MAPK4P31152 587 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 SLC4A10Q6U841 1118 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
CSNK1D-219ENST00000581660 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 RGS2P41220 211 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 MORN1Q5T089 497 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 APBA2Q99767 749 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 ATAD5Q96QE3 1844 aa17.32■□□□□ 0.36
CSNK1D-219ENST00000581660 EYA2O00167 538 aa17.31■□□□□ 0.36
CSNK1D-219ENST00000581660 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-219ENST00000581660 CCL14Q16627 93 aa17.31■□□□□ 0.36
CSNK1D-219ENST00000581660 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-219ENST00000581660 DENND2AQ9ULE3 1009 aa17.31■□□□□ 0.36
CSNK1D-219ENST00000581660 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 CAP2P40123 477 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 RTP1P59025 263 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 HERVK_113P62684 666 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 PICALMQ13492 652 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■■■■ 30.2
CSNK1D-219ENST00000581660 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
CSNK1D-219ENST00000581660 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 DNM1LO00429 736 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 MSCO60682 206 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 RHBDL3P58872 404 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 LPAR1Q92633 364 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 AS3MTQ9HBK9 375 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 RLFQ13129 1914 aa17.29■□□□□ 0.36
CSNK1D-219ENST00000581660 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 PEX10O60683 326 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 BTDP43251 543 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 BACE1P56817 501 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 ERVK-24P63145 666 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 DZIP1Q86YF9 867 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 PORCNQ9H237 461 aa17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 DDX20Q9UHI6 824 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-219ENST00000581660 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
CSNK1D-219ENST00000581660 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms