RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PIH1D3Q9NQM4 214 aaKnown RBP25.57■■□□□ 1.68
CCDC42-203ENST00000581598 CPA4Q9UI42 421 aa25.57■■□□□ 1.68
CCDC42-203ENST00000581598 DDX19BQ9UMR2 479 aa25.57■■□□□ 1.68
CCDC42-203ENST00000581598 EXOC6BQ9Y2D4 811 aa25.57■■□□□ 1.68
CCDC42-203ENST00000581598 TMED8Q6PL24 325 aaPredicted RBP25.56■■□□□ 1.68
CCDC42-203ENST00000581598 ADGRA1Q86SQ6 560 aa25.56■■□□□ 1.68
CCDC42-203ENST00000581598 NBPF11Q86T75 865 aa25.56■■□□□ 1.68
CCDC42-203ENST00000581598 ZNF333Q96JL9 665 aa25.56■■□□□ 1.68
CCDC42-203ENST00000581598 PI4KBQ9UBF8 816 aa25.56■■□□□ 1.68
CCDC42-203ENST00000581598 BCRP11274 1271 aa25.55■■□□□ 1.68
CCDC42-203ENST00000581598 SLC9C1Q4G0N8 1177 aa25.55■■□□□ 1.68
CCDC42-203ENST00000581598 CAP2P40123 477 aa25.54■■□□□ 1.68
CCDC42-203ENST00000581598 ZBTB40Q9NUA8 1239 aa25.54■■□□□ 1.68
CCDC42-203ENST00000581598 MGAMO43451 1857 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 POTEFA5A3E0 1075 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 FAM196BA6NMK8 535 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 AACSQ86V21 672 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 METTL16Q86W50 562 aaKnown RBP25.53■■□□□ 1.68
CCDC42-203ENST00000581598 CERS3Q8IU89 383 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 RHPN1Q8TCX5 695 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 CHMP4BQ9H444 224 aaKnown RBP25.53■■□□□ 1.68
CCDC42-203ENST00000581598 FLT1P17948 1338 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 LOC285556D6RIA3 1793 aa25.53■■□□□ 1.68
CCDC42-203ENST00000581598 TRIM75PA6NK02 468 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 HMMRO75330 724 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 CYP2C8P10632 490 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 HOXD10P28358 340 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 CTGFP29279 349 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 PSMC4P43686 418 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 GADL1Q6ZQY3 521 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 PROCA1Q8NCQ7 364 aaPredicted RBP25.52■■□□□ 1.68
CCDC42-203ENST00000581598 TGFBRAP1Q8WUH2 860 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 TRIM47Q96LD4 638 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 SRRDQ9UH36 339 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 RCAN3Q9UKA8 241 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 COG6Q9Y2V7 657 aa25.52■■□□□ 1.68
CCDC42-203ENST00000581598 FOXP4Q8IVH2 680 aaPredicted RBP25.51■■□□□ 1.67
CCDC42-203ENST00000581598 TMEM106CQ9BVX2 250 aa25.51■■□□□ 1.67
CCDC42-203ENST00000581598 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.51■■□□□ 1.67
CCDC42-203ENST00000581598 AGTPBP1Q9UPW5 1226 aa25.51■■□□□ 1.67
CCDC42-203ENST00000581598 IDH1O75874 414 aaKnown RBP25.5■■□□□ 1.67
CCDC42-203ENST00000581598 CYP7A1P22680 504 aa25.5■■□□□ 1.67
CCDC42-203ENST00000581598 RRP1BQ14684 758 aaKnown RBP25.5■■□□□ 1.67
CCDC42-203ENST00000581598 PRPF38BQ5VTL8 546 aaKnown RBP25.5■■□□□ 1.67
CCDC42-203ENST00000581598 MAPKAPK5Q8IW41 473 aa25.5■■□□□ 1.67
CCDC42-203ENST00000581598 ZNF280CQ8ND82 737 aa25.5■■□□□ 1.67
CCDC42-203ENST00000581598 KIF1BPQ96EK5 621 aa25.5■■□□□ 1.67
CCDC42-203ENST00000581598 USP17L5A8MUK1 530 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 OSBPP22059 807 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
CCDC42-203ENST00000581598 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 IL1RAPL2Q9NP60 686 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 GINM1Q9NU53 330 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 MYH1P12882 1939 aa25.49■■□□□ 1.67
CCDC42-203ENST00000581598 MAP3K12Q12852 859 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 SPP2Q13103 211 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 CLASRPQ8N2M8 674 aaKnown RBP25.48■■□□□ 1.67
CCDC42-203ENST00000581598 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.48■■□□□ 1.67
CCDC42-203ENST00000581598 ANTXR1Q9H6X2 564 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 DNAJC18Q9H819 358 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 AS3MTQ9HBK9 375 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 PCDH10Q9P2E7 1040 aa25.48■■□□□ 1.67
CCDC42-203ENST00000581598 CENPFP49454 3210 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 RAB11FIP3O75154 756 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 FMNL1O95466 1100 aaPredicted RBP25.47■■□□□ 1.67
CCDC42-203ENST00000581598 FCGRTP55899 365 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 DYNLL1P63167 89 aaKnown RBP25.47■■□□□ 1.67
CCDC42-203ENST00000581598 SH3D19Q5HYK7 790 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 WDR18Q9BV38 432 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 PNMA3Q9UL41 463 aa25.47■■□□□ 1.67
CCDC42-203ENST00000581598 MKI67P46013 3256 aaKnown RBP25.47■■□□□ 1.67
CCDC42-203ENST00000581598 ASNSP08243 561 aa25.46■■□□□ 1.67
CCDC42-203ENST00000581598 TTF1Q15361 905 aaPredicted RBP25.46■■□□□ 1.67
CCDC42-203ENST00000581598 MAGEB6Q8N7X4 407 aa25.46■■□□□ 1.67
CCDC42-203ENST00000581598 PALD1Q9ULE6 856 aa25.46■■□□□ 1.67
CCDC42-203ENST00000581598 MYPNQ86TC9 1320 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 HLA-DOAP06340 250 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 EN2P19622 333 aaPredicted RBP25.45■■□□□ 1.66
CCDC42-203ENST00000581598 PDE3AQ14432 1141 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 TREML2Q5T2D2 321 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 SMCR8Q8TEV9 937 aaPredicted RBP25.45■■□□□ 1.66
CCDC42-203ENST00000581598 SH3TC2Q8TF17 1288 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 NDUFB9Q9Y6M9 179 aa25.45■■□□□ 1.66
CCDC42-203ENST00000581598 PABPC4Q13310 644 aaKnown RBP eCLIP25.44■■□□□ 1.66
CCDC42-203ENST00000581598 CRACR2BQ8N4Y2 399 aaPredicted RBP25.44■■□□□ 1.66
CCDC42-203ENST00000581598 RAET1EQ8TD07 263 aa25.44■■□□□ 1.66
CCDC42-203ENST00000581598 MIGA1Q8NAN2 632 aa25.43■■□□□ 1.66
CCDC42-203ENST00000581598 TRIM34Q9BYJ4 488 aa25.43■■□□□ 1.66
CCDC42-203ENST00000581598 BRCA2P51587 3418 aa25.42■■□□□ 1.66
CCDC42-203ENST00000581598 IFIT2P09913 472 aaKnown RBP25.42■■□□□ 1.66
CCDC42-203ENST00000581598 GRK4P32298 578 aa25.42■■□□□ 1.66
CCDC42-203ENST00000581598 HMGCS2P54868 508 aa25.42■■□□□ 1.66
CCDC42-203ENST00000581598 SLC4A8Q2Y0W8 1093 aa25.42■■□□□ 1.66
CCDC42-203ENST00000581598 RIOK1Q9BRS2 568 aaKnown RBP25.42■■□□□ 1.66
CCDC42-203ENST00000581598 EHD4Q9H223 541 aa25.42■■□□□ 1.66
CCDC42-203ENST00000581598 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
CCDC42-203ENST00000581598 ECM2O94769 699 aaPredicted RBP25.41■■□□□ 1.66
CCDC42-203ENST00000581598 USP5P45974 858 aa25.41■■□□□ 1.66
CCDC42-203ENST00000581598 GCLCP48506 637 aaPredicted RBP25.41■■□□□ 1.66
CCDC42-203ENST00000581598 BACE1P56817 501 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms