RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TBC1D12O60347 775 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 BTDP43251 543 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 COL25A1Q9BXS0 654 aaPredicted RBP15.86■□□□□ 0.13
SS18-219ENST00000581570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.86■□□□□ 0.13
SS18-219ENST00000581570 ABCF2Q9UG63 623 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 PTPRCP08575 1304 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 RFX7Q2KHR2 1363 aa15.86■□□□□ 0.13
SS18-219ENST00000581570 CIAO1O76071 339 aa15.85■□□□□ 0.13
SS18-219ENST00000581570 CYP2B6P20813 491 aa15.85■□□□□ 0.13
SS18-219ENST00000581570 TRIB2Q92519 343 aa15.85■□□□□ 0.13
SS18-219ENST00000581570 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
SS18-219ENST00000581570 OSBPL5Q9H0X9 879 aaPredicted RBP15.85■□□□□ 0.13
SS18-219ENST00000581570 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
SS18-219ENST00000581570 ALPK3Q96L96 1907 aa15.84■□□□□ 0.13
SS18-219ENST00000581570 FAM196BA6NMK8 535 aa15.84■□□□□ 0.13
SS18-219ENST00000581570 HMGCS2P54868 508 aa15.84■□□□□ 0.13
SS18-219ENST00000581570 SPTY2D1Q68D10 685 aaPredicted RBP15.84■□□□□ 0.13
SS18-219ENST00000581570 CCDC102BQ68D86 513 aa15.84■□□□□ 0.13
SS18-219ENST00000581570 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
SS18-219ENST00000581570 ADORA1P30542 326 aa15.83■□□□□ 0.12
SS18-219ENST00000581570 MAP3K21Q5TCX8 1036 aa15.83■□□□□ 0.12
SS18-219ENST00000581570 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
SS18-219ENST00000581570 MROH7-TTC4A0A0A0MT08 1334 aa15.83■□□□□ 0.12
SS18-219ENST00000581570 PFASO15067 1338 aa15.83■□□□□ 0.12
SS18-219ENST00000581570 GPR75-ASB3A0A0A6YYF3 556 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 USP17L5A8MUK1 530 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 IL15P40933 162 aaPredicted RBP15.82■□□□□ 0.12
SS18-219ENST00000581570 RHBDL3P58872 404 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 RASGRF1Q13972 1273 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.82■□□□□ 0.12
SS18-219ENST00000581570 NUDT12Q9BQG2 462 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 DOCK2Q92608 1830 aa15.82■□□□□ 0.12
SS18-219ENST00000581570 COL6A1P12109 1028 aa15.81■□□□□ 0.12
SS18-219ENST00000581570 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
SS18-219ENST00000581570 CAP2P40123 477 aa15.81■□□□□ 0.12
SS18-219ENST00000581570 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
SS18-219ENST00000581570 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
SS18-219ENST00000581570 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
SS18-219ENST00000581570 ERICH6Q7L0X2 663 aa15.81■□□□□ 0.12
SS18-219ENST00000581570 DOCK3Q8IZD9 2030 aa15.81■□□□□ 0.12
SS18-219ENST00000581570 AS3MTQ9HBK9 375 aa15.81■□□□□ 0.12
SS18-219ENST00000581570 MYH13Q9UKX3 1938 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 DOCK1Q14185 1865 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 TIMM10P62072 90 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 MECOMQ03112 1051 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 RRP1BQ14684 758 aaKnown RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 LRRC26Q2I0M4 334 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 FAM109BQ6ICB4 259 aaPredicted RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 TRMT44Q8IYL2 757 aaKnown RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 SOCS4Q8WXH5 440 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 PA2G4Q9UQ80 394 aaKnown RBP15.8■□□□□ 0.12
SS18-219ENST00000581570 PTPRFP10586 1907 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 PHIPQ8WWQ0 1821 aa15.8■□□□□ 0.12
SS18-219ENST00000581570 MAP4K4O95819 1239 aaPredicted RBP15.79■□□□□ 0.12
SS18-219ENST00000581570 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
SS18-219ENST00000581570 ZKSCAN1P17029 563 aaPredicted RBP15.79■□□□□ 0.12
SS18-219ENST00000581570 CACNB2Q08289 660 aaPredicted RBP15.79■□□□□ 0.12
SS18-219ENST00000581570 PDE3AQ14432 1141 aa15.79■□□□□ 0.12
SS18-219ENST00000581570 GPRC5AQ8NFJ5 357 aa15.79■□□□□ 0.12
SS18-219ENST00000581570 GUCD1Q96NT3 240 aa15.79■□□□□ 0.12
SS18-219ENST00000581570 DDX60LQ5H9U9 1706 aaKnown RBP15.79■□□□□ 0.12
SS18-219ENST00000581570 PEX10O60683 326 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 LDHCP07864 332 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 MAPK4P31152 587 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 HOXA7P31268 230 aaPredicted RBP15.78■□□□□ 0.12
SS18-219ENST00000581570 LHX8Q68G74 356 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 WDR18Q9BV38 432 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 TXNRD2Q9NNW7 524 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 MYH2Q9UKX2 1941 aa15.78■□□□□ 0.12
SS18-219ENST00000581570 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
SS18-219ENST00000581570 BACE1P56817 501 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 HERVK_113P62684 666 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 GSTO1P78417 241 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 MTMR2Q13614 643 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 CCAR1Q8IX12 1150 aaKnown RBP15.77■□□□□ 0.12
SS18-219ENST00000581570 ZNF384Q8TF68 577 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 FAM161BQ96MY7 647 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
SS18-219ENST00000581570 COPRSQ9NQ92 184 aa15.77■□□□□ 0.12
SS18-219ENST00000581570 HERC5Q9UII4 1024 aaKnown RBP15.77■□□□□ 0.12
SS18-219ENST00000581570 RGS2P41220 211 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
SS18-219ENST00000581570 CCL14Q16627 93 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 Q3C1V9 767 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 USP6NLQ92738 828 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 NSUN4Q96CB9 384 aaKnown RBP15.76■□□□□ 0.11
SS18-219ENST00000581570 XAGE2Q96GT9 111 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
SS18-219ENST00000581570 A0A1B0GUL7 405 aa15.75■□□□□ 0.11
SS18-219ENST00000581570 C19orf81C9J6K1 198 aa15.75■□□□□ 0.11
SS18-219ENST00000581570 ASNSP08243 561 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms