RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ZSCAN26Q16670 478 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 PPP1R21Q6ZMI0 780 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 NLRP3Q96P20 1036 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 MRRFQ96E11 262 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 ARHGEF12Q9NZN5 1544 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 SPATS2Q86XZ4 545 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 AFAP1L2Q8N4X5 818 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 TRIM31Q9BZY9 425 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.186e-8■■□□□ 13.9
CSNK1D-217ENST00000581241 KRT9P35527 623 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 I3L4J1 428 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 SGSM2O43147 1006 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 SFMBT2Q5VUG0 894 aa16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-217ENST00000581241 STX10O60499 249 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 MAP2K2P36507 400 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 RPS6KA1Q15418 735 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 ANGEL1Q9UNK9 670 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 MAPK8IP1Q9UQF2 711 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 B4DLN1 442 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 SETSIPP0DME0 302 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 MAGEA1P43355 309 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 CCDC38Q502W7 563 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 DENND2AQ9ULE3 1009 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 NPATQ14207 1427 aa16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-217ENST00000581241 TRPC3Q13507 836 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 CETN3O15182 167 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 RAB17Q9H0T7 212 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 ASIC3Q9UHC3 531 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 NUCKS1Q9H1E3 243 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 EXOC7Q9UPT5 735 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 GNGT1P63211 74 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 KIFC2Q96AC6 838 aa16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 XPO4Q9C0E2 1151 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-217ENST00000581241 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 MAIP1Q8WWC4 291 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 STK10O94804 968 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 CHRNA2Q15822 529 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 SDCCAG8Q86SQ7 713 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 BIRC3Q13489 604 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 PNOCQ13519 176 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 CTTNBP2NLQ9P2B4 639 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 SAR1BQ9Y6B6 198 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 CAPN7Q9Y6W3 813 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 PLCH2O75038 1416 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 BRD1O95696 1058 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 RASSF2P50749 326 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 RASA3Q14644 834 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 NUF2Q9BZD4 464 aa16.15■□□□□ 0.18
CSNK1D-217ENST00000581241 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 SMTNP53814 917 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 FLOT1O75955 427 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 GEN1Q17RS7 908 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 KLHL30Q0D2K2 578 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 LGSNQ5TDP6 509 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 PEX26Q7Z412 305 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 EPSTI1Q96J88 318 aa16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 PPANQ9NQ55 473 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-217ENST00000581241 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-217ENST00000581241 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
CSNK1D-217ENST00000581241 IFIH1Q9BYX4 1025 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms