RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 ZNF295-AS1Q8N0V1 137 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 CCDC155Q8N6L0 562 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 ZNF775Q96BV0 537 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-213ENST00000580949 KIF1BPQ96EK5 621 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
PTPRM-213ENST00000580949 COPRSQ9NQ92 184 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 NOVA2Q9UNW9 492 aaKnown RBP7.66□□□□□ -1.18
PTPRM-213ENST00000580949 DYRK1BQ9Y463 629 aa7.66□□□□□ -1.18
PTPRM-213ENST00000580949 TERTO14746 1132 aaKnown RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 PPFIA3O75145 1194 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 SDSP20132 328 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 MX1P20591 662 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 G3BP1Q13283 466 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 OS9Q13438 667 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 HSP90AB4PQ58FF6 505 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 HSP90AB3PQ58FF7 597 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 NUP188Q5SRE5 1749 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 SUSD4Q5VX71 490 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 UBN2Q6ZU65 1347 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 KRT27Q7Z3Y8 459 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 ZBTB38Q8NAP3 1195 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 PLA2G12BQ9BX93 195 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 CNTNAP4Q9C0A0 1308 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 SIL1Q9H173 461 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 LRRC4BQ9NT99 713 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 RGS17Q9UGC6 210 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 CCNL1Q9UK58 526 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-213ENST00000580949 ARFGEF2Q9Y6D5 1785 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 USP3Q9Y6I4 520 aa7.65□□□□□ -1.18
PTPRM-213ENST00000580949 RPS6KA4O75676 772 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 CSF1RP07333 972 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 ZNF772Q68DY9 489 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-213ENST00000580949 FAM196AQ6ZSG2 479 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 ATG9AQ7Z3C6 839 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 PI4K2BQ8TCG2 481 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 EAF2Q96CJ1 260 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-213ENST00000580949 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
PTPRM-213ENST00000580949 CDHR2Q9BYE9 1310 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 USP42Q9H9J4 1324 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 MYH14Q7Z406 1995 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 H3BM21 787 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 CDC45O75419 566 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 TRIM37O94972 964 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 PHKA2P46019 1235 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 TFCP2Q12800 502 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 ERC1Q8IUD2 1116 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 TTLL11Q8NHH1 800 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 TLR7Q9NYK1 1049 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 SRP68Q9UHB9 627 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 TRMT112Q9UI30 125 aaKnown RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 RREB1Q92766 1687 aa7.63□□□□□ -1.19
PTPRM-213ENST00000580949 CICQ96RK0 1608 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-213ENST00000580949 AOX1Q06278 1338 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 FAM177BA6PVY3 158 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 EYA2O00167 538 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 IRS4O14654 1257 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 HCLS1P14317 486 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 ITGA6P23229 1130 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 PLA2G4AP47712 749 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 MFAP1P55081 439 aaKnown RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 NFX1Q12986 1120 aaKnown RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 TEAD4Q15561 434 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 LRRC24Q50LG9 513 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 POTEAQ6S8J7 498 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 AACSQ86V21 672 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 CLASRPQ8N2M8 674 aaKnown RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 CCDC8Q9H0W5 538 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-213ENST00000580949 NHSQ6T4R5 1651 aa7.62□□□□□ -1.19
PTPRM-213ENST00000580949 ZNF831Q5JPB2 1677 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 NTSR2O95665 410 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 F11P03951 625 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 RXRBP28702 533 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 ANP32AP39687 249 aaKnown RBP7.61□□□□□ -1.19
PTPRM-213ENST00000580949 CTSWP56202 376 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 PSMA6P60900 246 aaKnown RBP7.61□□□□□ -1.19
PTPRM-213ENST00000580949 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 PARP10Q53GL7 1025 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 TNNI3KQ59H18 835 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 CLEC4GQ6UXB4 293 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 FBXO41Q8TF61 875 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 IPO9Q96P70 1041 aaKnown RBP7.61□□□□□ -1.19
PTPRM-213ENST00000580949 HINFPQ9BQA5 517 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 UTP14AQ9BVJ6 771 aaKnown RBP7.61□□□□□ -1.19
PTPRM-213ENST00000580949 GREM2Q9H772 168 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 ECHDC1Q9NTX5 307 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 NARFQ9UHQ1 456 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 NIP7Q9Y221 180 aaKnown RBP eCLIP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms