RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 MOGSQ13724 837 aa12.72□□□□□ -0.37
NCOR1-220ENST00000580617 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
NCOR1-220ENST00000580617 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
NCOR1-220ENST00000580617 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
NCOR1-220ENST00000580617 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
NCOR1-220ENST00000580617 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
NCOR1-220ENST00000580617 FLT1P17948 1338 aa12.72□□□□□ -0.37
NCOR1-220ENST00000580617 TLR2O60603 784 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 RAB11FIP3O75154 756 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 CYP7A1P22680 504 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
NCOR1-220ENST00000580617 ANKRD23Q86SG2 305 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
NCOR1-220ENST00000580617 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
NCOR1-220ENST00000580617 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
NCOR1-220ENST00000580617 PDHXO00330 501 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 CXCL11O14625 94 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
NCOR1-220ENST00000580617 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
NCOR1-220ENST00000580617 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 AFG3L2Q9Y4W6 797 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
NCOR1-220ENST00000580617 MYH8P13535 1937 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 A0A0G2JLL6 359 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 PRRT2Q7Z6L0 340 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 PTPN22Q9Y2R2 807 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 TRIM75PA6NK02 468 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 ARHGAP39Q9C0H5 1083 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 DHX36Q9H2U1 1008 aaKnown RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 DNAJC18Q9H819 358 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 HERC5Q9UII4 1024 aaKnown RBP12.69□□□□□ -0.38
NCOR1-220ENST00000580617 PALD1Q9ULE6 856 aa12.69□□□□□ -0.38
NCOR1-220ENST00000580617 CENPFP49454 3210 aa12.68□□□□□ -0.38
NCOR1-220ENST00000580617 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
NCOR1-220ENST00000580617 CYP2C8P10632 490 aa12.68□□□□□ -0.38
NCOR1-220ENST00000580617 CAP2P40123 477 aa12.68□□□□□ -0.38
NCOR1-220ENST00000580617 LACTBP83111 547 aaPredicted RBP12.68□□□□□ -0.38
NCOR1-220ENST00000580617 TTF1Q15361 905 aaPredicted RBP12.68□□□□□ -0.38
NCOR1-220ENST00000580617 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
NCOR1-220ENST00000580617 GADL1Q6ZQY3 521 aa12.68□□□□□ -0.38
NCOR1-220ENST00000580617 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
NCOR1-220ENST00000580617 DOCK3Q8IZD9 2030 aa12.67□□□□□ -0.38
NCOR1-220ENST00000580617 GOLIM4O00461 696 aa12.67□□□□□ -0.38
NCOR1-220ENST00000580617 SMARCA5O60264 1052 aaPredicted RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 PDE6AP16499 860 aa12.67□□□□□ -0.38
NCOR1-220ENST00000580617 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
NCOR1-220ENST00000580617 TMED8Q6PL24 325 aaPredicted RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 FASTKD5Q7L8L6 764 aaKnown RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 EDC3Q96F86 508 aaKnown RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 RIOK1Q9BRS2 568 aaKnown RBP12.67□□□□□ -0.38
NCOR1-220ENST00000580617 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
NCOR1-220ENST00000580617 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
NCOR1-220ENST00000580617 ATP5JP18859 108 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 CTGFP29279 349 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 USP5P45974 858 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 JAG1P78504 1218 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 SPP2Q13103 211 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
NCOR1-220ENST00000580617 SLC9C2Q5TAH2 1124 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 FOXP4Q8IVH2 680 aaPredicted RBP12.66□□□□□ -0.38
NCOR1-220ENST00000580617 CRACR2BQ8N4Y2 399 aaPredicted RBP12.66□□□□□ -0.38
NCOR1-220ENST00000580617 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 PTCH2Q9Y6C5 1203 aa12.66□□□□□ -0.38
NCOR1-220ENST00000580617 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 USP17L5A8MUK1 530 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 BCRP11274 1271 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
NCOR1-220ENST00000580617 KIF22Q14807 665 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 ARMC5Q96C12 935 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
NCOR1-220ENST00000580617 ZNF532Q9HCE3 1301 aa12.64□□□□□ -0.39
NCOR1-220ENST00000580617 GDF11O95390 407 aa12.64□□□□□ -0.39
NCOR1-220ENST00000580617 ASNSP08243 561 aa12.64□□□□□ -0.39
NCOR1-220ENST00000580617 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
NCOR1-220ENST00000580617 HAUS7Q99871 368 aa12.64□□□□□ -0.39
NCOR1-220ENST00000580617 TBC1D2Q9BYX2 928 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms