RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
SKA2-205ENST00000580541 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.31
SKA2-205ENST00000580541 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.31
SKA2-205ENST00000580541 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
SKA2-205ENST00000580541 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
SKA2-205ENST00000580541 DDTLA6NHG4 134 aaPredicted RBP16.95■□□□□ 0.3
SKA2-205ENST00000580541 KIF3CO14782 793 aa16.95■□□□□ 0.3
SKA2-205ENST00000580541 FOXP2O15409 715 aa16.95■□□□□ 0.3
SKA2-205ENST00000580541 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
SKA2-205ENST00000580541 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
SKA2-205ENST00000580541 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
SKA2-205ENST00000580541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.95■□□□□ 0.3
SKA2-205ENST00000580541 BAZ2AQ9UIF9 1905 aaKnown RBP16.95■□□□□ 0.3
SKA2-205ENST00000580541 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
SKA2-205ENST00000580541 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
SKA2-205ENST00000580541 PLCD1P51178 756 aa16.94■□□□□ 0.3
SKA2-205ENST00000580541 FSTL1Q12841 308 aa16.94■□□□□ 0.3
SKA2-205ENST00000580541 NBPF12Q5TAG4 269 aaPredicted RBP16.94■□□□□ 0.3
SKA2-205ENST00000580541 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
SKA2-205ENST00000580541 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
SKA2-205ENST00000580541 TEPSINQ96N21 525 aa16.94■□□□□ 0.3
SKA2-205ENST00000580541 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
SKA2-205ENST00000580541 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 ADM5C9JUS6 153 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 HSPA4P34932 840 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 MAP3K10Q02779 954 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 TSGA10IPQ3SY00 556 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 AKNAD1Q5T1N1 836 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 CCDC17Q96LX7 622 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 ZNF341Q9BYN7 854 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 KRT23Q9C075 422 aa16.93■□□□□ 0.3
SKA2-205ENST00000580541 SLC27A2O14975 620 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 PSMA5P28066 241 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 ANAPC15P60006 121 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 HAND2P61296 217 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 FKBP1BP68106 108 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
SKA2-205ENST00000580541 SCAF8Q9UPN6 1271 aaKnown RBP16.92■□□□□ 0.3
SKA2-205ENST00000580541 UNCXA6NJT0 531 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 SEC24BO95487 1268 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 CYP21A2P08686 494 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
SKA2-205ENST00000580541 CYP2D6P10635 497 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 IREB2P48200 963 aaKnown RBP16.91■□□□□ 0.3
SKA2-205ENST00000580541 CDK8P49336 464 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 GABPAQ06546 454 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
SKA2-205ENST00000580541 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
SKA2-205ENST00000580541 C2orf69Q8N8R5 385 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
SKA2-205ENST00000580541 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 CYP2D7A0A087X1C5 515 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 ORC4O43929 436 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
SKA2-205ENST00000580541 FGRP09769 529 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 CTDSPL2Q05D32 466 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
SKA2-205ENST00000580541 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 PRAMEF18Q5VWM3 479 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 ESR2Q92731 530 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 KCNB2Q92953 911 aa16.9■□□□□ 0.3
SKA2-205ENST00000580541 CTNND1O60716 968 aaKnown RBP16.89■□□□□ 0.29
SKA2-205ENST00000580541 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
SKA2-205ENST00000580541 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
SKA2-205ENST00000580541 E7EWF7 191 aa16.88■□□□□ 0.29
SKA2-205ENST00000580541 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
SKA2-205ENST00000580541 CELF2O95319 508 aaKnown RBP16.88■□□□□ 0.29
SKA2-205ENST00000580541 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
SKA2-205ENST00000580541 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
SKA2-205ENST00000580541 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
SKA2-205ENST00000580541 TSPY2A6NKD2 308 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 TRAF5O00463 557 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
SKA2-205ENST00000580541 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 SART3Q15020 963 aaKnown RBP16.87■□□□□ 0.29
SKA2-205ENST00000580541 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
SKA2-205ENST00000580541 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 KLRG1Q96E93 195 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 GBA2Q9HCG7 927 aaPredicted RBP16.87■□□□□ 0.29
SKA2-205ENST00000580541 ZNF112Q9UJU3 913 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 ANGEL1Q9UNK9 670 aaKnown RBP16.87■□□□□ 0.29
SKA2-205ENST00000580541 CSADQ9Y600 493 aa16.87■□□□□ 0.29
SKA2-205ENST00000580541 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
SKA2-205ENST00000580541 ASNSP08243 561 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 MCM5P33992 734 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms