RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 LPIN2Q92539 896 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 DNAH12Q6ZR08 3092 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 ATG9AQ7Z3C6 839 aa24.02■■□□□ 1.44
LIMD2-209ENST00000580222 ZSCAN29Q8IWY8 852 aaPredicted RBP24.02■■□□□ 1.44
LIMD2-209ENST00000580222 FAM161BQ96MY7 647 aa24.02■■□□□ 1.44
LIMD2-209ENST00000580222 FAM196BA6NMK8 535 aa24.01■■□□□ 1.43
LIMD2-209ENST00000580222 IPO8O15397 1037 aaKnown RBP24.01■■□□□ 1.43
LIMD2-209ENST00000580222 COL6A1P12109 1028 aa24.01■■□□□ 1.43
LIMD2-209ENST00000580222 SLC5A1P13866 664 aa24.01■■□□□ 1.43
LIMD2-209ENST00000580222 MDM2Q00987 491 aaPredicted RBP24.01■■□□□ 1.43
LIMD2-209ENST00000580222 MAP3K21Q5TCX8 1036 aa24.01■■□□□ 1.43
LIMD2-209ENST00000580222 API5Q9BZZ5 524 aaKnown RBP24.01■■□□□ 1.43
LIMD2-209ENST00000580222 EYA2O00167 538 aa24■■□□□ 1.43
LIMD2-209ENST00000580222 LRRC26Q2I0M4 334 aa24■■□□□ 1.43
LIMD2-209ENST00000580222 SPP2Q13103 211 aa23.99■■□□□ 1.43
LIMD2-209ENST00000580222 RRP1BQ14684 758 aaKnown RBP23.99■■□□□ 1.43
LIMD2-209ENST00000580222 ZKSCAN2Q63HK3 967 aa23.99■■□□□ 1.43
LIMD2-209ENST00000580222 GAKO14976 1311 aa23.99■■□□□ 1.43
LIMD2-209ENST00000580222 DDX60LQ5H9U9 1706 aaKnown RBP23.98■■□□□ 1.43
LIMD2-209ENST00000580222 AK9Q5TCS8 1911 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 CYP2B6P20813 491 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 PHKA1P46020 1223 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 PICALMQ13492 652 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 ARHGAP45Q92619 1136 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 USP44Q9H0E7 712 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 ASCC2Q9H1I8 757 aaPredicted RBP23.98■■□□□ 1.43
LIMD2-209ENST00000580222 SALL1Q9NSC2 1324 aa23.98■■□□□ 1.43
LIMD2-209ENST00000580222 PRKAR2AP13861 404 aaKnown RBP23.97■■□□□ 1.43
LIMD2-209ENST00000580222 HMGCS2P54868 508 aa23.97■■□□□ 1.43
LIMD2-209ENST00000580222 FAM109BQ6ICB4 259 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-209ENST00000580222 ATF7IPQ6VMQ6 1270 aa23.97■■□□□ 1.43
LIMD2-209ENST00000580222 PROCA1Q8NCQ7 364 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-209ENST00000580222 PHIPQ8WWQ0 1821 aa23.97■■□□□ 1.43
LIMD2-209ENST00000580222 PNMA3Q9UL41 463 aa23.97■■□□□ 1.43
LIMD2-209ENST00000580222 GCLCP48506 637 aaPredicted RBP23.96■■□□□ 1.43
LIMD2-209ENST00000580222 LHX8Q68G74 356 aa23.96■■□□□ 1.43
LIMD2-209ENST00000580222 PTPRFP10586 1907 aa23.96■■□□□ 1.43
LIMD2-209ENST00000580222 TRIM27P14373 513 aa23.95■■□□□ 1.42
LIMD2-209ENST00000580222 ADORA1P30542 326 aa23.94■■□□□ 1.42
LIMD2-209ENST00000580222 CACNB2Q08289 660 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-209ENST00000580222 ZNF280CQ8ND82 737 aa23.94■■□□□ 1.42
LIMD2-209ENST00000580222 TXNRD2Q9NNW7 524 aa23.94■■□□□ 1.42
LIMD2-209ENST00000580222 MORF4L1Q9UBU8 362 aa23.94■■□□□ 1.42
LIMD2-209ENST00000580222 TNNQ9UQP3 1299 aa23.94■■□□□ 1.42
LIMD2-209ENST00000580222 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-209ENST00000580222 CCND3P30281 292 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-209ENST00000580222 BTDP43251 543 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 RHBDL3P58872 404 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 ATP2B3Q16720 1220 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 FTSJ3Q8IY81 847 aaKnown RBP23.93■■□□□ 1.42
LIMD2-209ENST00000580222 ZNF384Q8TF68 577 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 CLUAP1Q96AJ1 413 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 SIL1Q9H173 461 aa23.93■■□□□ 1.42
LIMD2-209ENST00000580222 COL2A1P02458 1487 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-209ENST00000580222 PLXNB2O15031 1838 aa23.92■■□□□ 1.42
LIMD2-209ENST00000580222 DOCK2Q92608 1830 aa23.92■■□□□ 1.42
LIMD2-209ENST00000580222 TBC1D12O60347 775 aa23.92■■□□□ 1.42
LIMD2-209ENST00000580222 CCL14Q16627 93 aa23.92■■□□□ 1.42
LIMD2-209ENST00000580222 FAM163AQ96GL9 167 aaPredicted RBP23.92■■□□□ 1.42
LIMD2-209ENST00000580222 P2RX7Q99572 595 aaKnown RBP23.92■■□□□ 1.42
LIMD2-209ENST00000580222 DENND2AQ9ULE3 1009 aa23.92■■□□□ 1.42
LIMD2-209ENST00000580222 POTEEQ6S8J3 1075 aa23.91■■□□□ 1.42
LIMD2-209ENST00000580222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.91■■□□□ 1.42
LIMD2-209ENST00000580222 GNL3LQ9NVN8 582 aaKnown RBP23.91■■□□□ 1.42
LIMD2-209ENST00000580222 CDH23Q9H251 3354 aa23.91■■□□□ 1.42
LIMD2-209ENST00000580222 DOCK1Q14185 1865 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
LIMD2-209ENST00000580222 JAG1P78504 1218 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 SH3D19Q5HYK7 790 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 USP6NLQ92738 828 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 CDX2Q99626 313 aaPredicted RBP23.9■■□□□ 1.42
LIMD2-209ENST00000580222 PRDM6Q9NQX0 595 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 TTC28Q96AY4 2481 aa23.9■■□□□ 1.42
LIMD2-209ENST00000580222 MS4A1P11836 297 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 XRCC5P13010 732 aaKnown RBP23.89■■□□□ 1.41
LIMD2-209ENST00000580222 RASGRF1Q13972 1273 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 Q3C1V9 767 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 CCDC102BQ68D86 513 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 ABCF2Q9UG63 623 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 MUC3AQ02505 3323 aa23.89■■□□□ 1.41
LIMD2-209ENST00000580222 SEMA3EO15041 775 aa23.88■■□□□ 1.41
LIMD2-209ENST00000580222 CAP2P40123 477 aa23.88■■□□□ 1.41
LIMD2-209ENST00000580222 DZIP1Q86YF9 867 aaKnown RBP23.88■■□□□ 1.41
LIMD2-209ENST00000580222 NUDT12Q9BQG2 462 aa23.88■■□□□ 1.41
LIMD2-209ENST00000580222 OSBPL5Q9H0X9 879 aaPredicted RBP23.88■■□□□ 1.41
LIMD2-209ENST00000580222 CEP126Q9P2H0 1117 aa23.88■■□□□ 1.41
LIMD2-209ENST00000580222 RBPJLQ9UBG7 517 aa23.88■■□□□ 1.41
LIMD2-209ENST00000580222 GPR75-ASB3A0A0A6YYF3 556 aa23.87■■□□□ 1.41
LIMD2-209ENST00000580222 PABPC4Q13310 644 aaKnown RBP eCLIP23.87■■□□□ 1.41
LIMD2-209ENST00000580222 PORCNQ9H237 461 aa23.87■■□□□ 1.41
LIMD2-209ENST00000580222 MROH7-TTC4A0A0A0MT08 1334 aa23.86■■□□□ 1.41
LIMD2-209ENST00000580222 USP17L5A8MUK1 530 aa23.86■■□□□ 1.41
LIMD2-209ENST00000580222 ZKSCAN1P17029 563 aaPredicted RBP23.86■■□□□ 1.41
LIMD2-209ENST00000580222 MECOMQ03112 1051 aa23.86■■□□□ 1.41
LIMD2-209ENST00000580222 SHROOM1Q2M3G4 852 aaPredicted RBP23.86■■□□□ 1.41
LIMD2-209ENST00000580222 MTMR2Q13614 643 aa23.85■■□□□ 1.41
LIMD2-209ENST00000580222 MORN1Q5T089 497 aa23.85■■□□□ 1.41
LIMD2-209ENST00000580222 TMEM57Q8N5G2 664 aa23.85■■□□□ 1.41
LIMD2-209ENST00000580222 GPRC5AQ8NFJ5 357 aa23.85■■□□□ 1.41
LIMD2-209ENST00000580222 SEMA6BQ9H3T3 888 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms