RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 OCLNQ16625 522 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 ATCAYQ86WG3 371 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 EDEM1Q92611 657 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 WDR89Q96FK6 387 aaPredicted RBP5.09□□□□□ -1.59
KPNB1-208ENST00000580019 HSPA12BQ96MM6 686 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 MKNK1Q9BUB5 465 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 BDH2Q9BUT1 245 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 FOXQ1Q9C009 403 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 SLAMF8Q9P0V8 285 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 GRIN3BO60391 1043 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 SSPNQ14714 243 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 SWI5Q1ZZU3 235 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 CAPN12Q6ZSI9 719 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 ZNF605Q86T29 641 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 ISL2Q96A47 359 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 SLC6A17Q9H1V8 727 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 CCDC86Q9H6F5 360 aaKnown RBP5.08□□□□□ -1.6
KPNB1-208ENST00000580019 GCM1Q9NP62 436 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 PRDM10Q9NQV6 1147 aa5.08□□□□□ -1.6
KPNB1-208ENST00000580019 FSHBP01225 129 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 HPXP02790 462 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 NEFMP07197 916 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 ERVFC1P60507 584 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 DNM1Q05193 864 aaKnown RBP5.07□□□□□ -1.6
KPNB1-208ENST00000580019 SPRED3Q2MJR0 410 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 KIF4BQ2VIQ3 1234 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 CCNJLQ8IV13 435 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 SNX29Q8TEQ0 813 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 RNF32Q9H0A6 362 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 ADAM7Q9H2U9 754 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 PCDHGC5Q9Y5F6 944 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 SHROOM4Q9ULL8 1493 aa5.07□□□□□ -1.6
KPNB1-208ENST00000580019 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 FAM155AB1AL88 458 aaPredicted RBP5.06□□□□□ -1.6
KPNB1-208ENST00000580019 PDGFAP04085 211 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 GRIA4P48058 902 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 AFF3P51826 1226 aaKnown RBP5.06□□□□□ -1.6
KPNB1-208ENST00000580019 FRMD5Q7Z6J6 570 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 CCDC82Q8N4S0 544 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 TRAIPQ9BWF2 469 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 PPP1R12CQ9BZL4 782 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 PRDM5Q9NQX1 630 aaPredicted RBP5.06□□□□□ -1.6
KPNB1-208ENST00000580019 CNOT11Q9UKZ1 510 aaKnown RBP5.06□□□□□ -1.6
KPNB1-208ENST00000580019 MAPK8IP1Q9UQF2 711 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 AMOTL2Q9Y2J4 779 aa5.06□□□□□ -1.6
KPNB1-208ENST00000580019 ZNF862O60290 1169 aa5.05□□□□□ -1.6
KPNB1-208ENST00000580019 TNFRSF21O75509 655 aa5.05□□□□□ -1.6
KPNB1-208ENST00000580019 PI3P19957 117 aa5.05□□□□□ -1.6
KPNB1-208ENST00000580019 DACT3Q96B18 629 aaPredicted RBP5.05□□□□□ -1.6
KPNB1-208ENST00000580019 SGPP1Q9BX95 441 aa5.05□□□□□ -1.6
KPNB1-208ENST00000580019 TMEM59LQ9UK28 342 aa5.05□□□□□ -1.6
KPNB1-208ENST00000580019 ACIN1Q9UKV3 1341 aaKnown RBP5.04□□□□□ -1.6
KPNB1-208ENST00000580019 DNAJC25-GNG10A0A024R161 153 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 A0A1W2PP55 124 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 H3BS24 57 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 HK2P52789 917 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 CDKAL1Q5VV42 579 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 GLMNQ92990 594 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 DNAJC25Q9H1X3 360 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 SLITRK6Q9H5Y7 841 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
KPNB1-208ENST00000580019 MATN3O15232 486 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 MZF1P28698 734 aaPredicted RBP5.03□□□□□ -1.6
KPNB1-208ENST00000580019 LMOD1P29536 600 aaPredicted RBP5.03□□□□□ -1.6
KPNB1-208ENST00000580019 RALGPS1Q5JS13 557 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 THAP5Q7Z6K1 395 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 SYT8Q8NBV8 401 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 RNF214Q8ND24 703 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 PANK1Q8TE04 598 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 SIGLEC10Q96LC7 697 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 TCF12Q99081 682 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 ZC3H12CQ9C0D7 883 aaKnown RBP5.03□□□□□ -1.6
KPNB1-208ENST00000580019 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 ZNF552Q9H707 407 aaPredicted RBP5.03□□□□□ -1.6
KPNB1-208ENST00000580019 LIN7BQ9HAP6 207 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 IRAK3Q9Y616 596 aa5.03□□□□□ -1.6
KPNB1-208ENST00000580019 K7ESM1 405 aa5.02□□□□□ -1.61
KPNB1-208ENST00000580019 EOMESO95936 686 aa5.02□□□□□ -1.61
KPNB1-208ENST00000580019 TRHRP34981 398 aaPredicted RBP5.02□□□□□ -1.61
KPNB1-208ENST00000580019 LUC7LQ9NQ29 371 aaKnown RBP5.02□□□□□ -1.61
KPNB1-208ENST00000580019 CXXC1Q9P0U4 656 aaPredicted RBP5.02□□□□□ -1.61
KPNB1-208ENST00000580019 C22orf34Q6ZV56 151 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 AEBP1Q8IUX7 1158 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 LILRA2Q8N149 483 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 MFSD4AQ8N468 514 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 MRIQ9BWK5 157 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 FOXD3Q9UJU5 478 aaPredicted RBP5.01□□□□□ -1.61
KPNB1-208ENST00000580019 SERPINA10Q9UK55 444 aa5.01□□□□□ -1.61
KPNB1-208ENST00000580019 RTP5Q14D33 572 aa5□□□□□ -1.61
KPNB1-208ENST00000580019 TMCO4Q5TGY1 634 aa5□□□□□ -1.61
KPNB1-208ENST00000580019 CLUAP1Q96AJ1 413 aa5□□□□□ -1.61
KPNB1-208ENST00000580019 CCDC97Q96F63 343 aaPredicted RBP5□□□□□ -1.61
KPNB1-208ENST00000580019 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
KPNB1-208ENST00000580019 NOVA2Q9UNW9 492 aaKnown RBP5□□□□□ -1.61
KPNB1-208ENST00000580019 LOC105371045A0A1W2PR82 267 aa4.99□□□□□ -1.61
KPNB1-208ENST00000580019 ERVK-24P63145 666 aa4.99□□□□□ -1.61
KPNB1-208ENST00000580019 RGS22Q8NE09 1264 aa4.99□□□□□ -1.61
KPNB1-208ENST00000580019 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms