RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TBC1D12O60347 775 aa17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 LDHBP07195 334 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 CYP2B6P20813 491 aa17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 CACNB2Q08289 660 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 GAKO14976 1311 aa17.38■□□□□ 0.37
CSNK1D-211ENST00000579316 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 ZSCAN29Q8IWY8 852 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 MYLIPQ8WY64 445 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 USP6NLQ92738 828 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 FRMPD3Q5JV73 1810 aa17.37■□□□□ 0.37
CSNK1D-211ENST00000579316 BDP1A6H8Y1 2624 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 ZBTB22O15209 634 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 SLC5A1P13866 664 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 SPP2Q13103 211 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 SH3D19Q5HYK7 790 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 LPIN2Q92539 896 aa17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-211ENST00000579316 TNFRSF10AO00220 468 aa17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 HMGCS2P54868 508 aa17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 TJAP1Q5JTD0 557 aa17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 OSBPL5Q9H0X9 879 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 MYH2Q9UKX2 1941 aa17.35■□□□□ 0.37
CSNK1D-211ENST00000579316 FOSL2P15408 326 aa17.34■□□□□ 0.37
CSNK1D-211ENST00000579316 PLA2G5P39877 138 aa17.34■□□□□ 0.37
CSNK1D-211ENST00000579316 SHHQ15465 462 aa17.34■□□□□ 0.37
CSNK1D-211ENST00000579316 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
CSNK1D-211ENST00000579316 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 SEMA3EO15041 775 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 MAPK4P31152 587 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 SLC4A10Q6U841 1118 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
CSNK1D-211ENST00000579316 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 RGS2P41220 211 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 MORN1Q5T089 497 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 APBA2Q99767 749 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 ATAD5Q96QE3 1844 aa17.32■□□□□ 0.36
CSNK1D-211ENST00000579316 EYA2O00167 538 aa17.31■□□□□ 0.36
CSNK1D-211ENST00000579316 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-211ENST00000579316 CCL14Q16627 93 aa17.31■□□□□ 0.36
CSNK1D-211ENST00000579316 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-211ENST00000579316 DENND2AQ9ULE3 1009 aa17.31■□□□□ 0.36
CSNK1D-211ENST00000579316 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 CAP2P40123 477 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 RTP1P59025 263 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 HERVK_113P62684 666 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 PICALMQ13492 652 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.361e-7■■■■■ 30
CSNK1D-211ENST00000579316 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
CSNK1D-211ENST00000579316 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 DNM1LO00429 736 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 MSCO60682 206 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 RHBDL3P58872 404 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 LPAR1Q92633 364 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 AS3MTQ9HBK9 375 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 RLFQ13129 1914 aa17.29■□□□□ 0.36
CSNK1D-211ENST00000579316 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 PEX10O60683 326 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 BTDP43251 543 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 BACE1P56817 501 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 ERVK-24P63145 666 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 DZIP1Q86YF9 867 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 PORCNQ9H237 461 aa17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 DDX20Q9UHI6 824 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-211ENST00000579316 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms