RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 GPAT2Q6NUI2 795 aa14.1□□□□□ -0.15
SSH2-208ENST00000579040 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
SSH2-208ENST00000579040 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
SSH2-208ENST00000579040 AATFQ9NY61 560 aaKnown RBP eCLIP14.1□□□□□ -0.15
SSH2-208ENST00000579040 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
SSH2-208ENST00000579040 SLC9C1Q4G0N8 1177 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 AACSQ86V21 672 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
SSH2-208ENST00000579040 ZBTB40Q9NUA8 1239 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 CPA4Q9UI42 421 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 PTCH2Q9Y6C5 1203 aa14.09□□□□□ -0.15
SSH2-208ENST00000579040 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 CAP2P40123 477 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 GADL1Q6ZQY3 521 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 ARHGAP39Q9C0H5 1083 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 FLT1P17948 1338 aa14.08□□□□□ -0.16
SSH2-208ENST00000579040 TRIM75PA6NK02 468 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
SSH2-208ENST00000579040 BCRP11274 1271 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 CYP7A1P22680 504 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 HOXD10P28358 340 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 PSMC4P43686 418 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 MAP3K12Q12852 859 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 METTL16Q86W50 562 aaKnown RBP14.07□□□□□ -0.16
SSH2-208ENST00000579040 CLASRPQ8N2M8 674 aaKnown RBP14.07□□□□□ -0.16
SSH2-208ENST00000579040 PROCA1Q8NCQ7 364 aaPredicted RBP14.07□□□□□ -0.16
SSH2-208ENST00000579040 TGFBRAP1Q8WUH2 860 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 DOCK3Q8IZD9 2030 aa14.07□□□□□ -0.16
SSH2-208ENST00000579040 MYH7P12883 1935 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 POTEFA5A3E0 1075 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 USP17L5A8MUK1 530 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 CYP2C8P10632 490 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 TTF1Q15361 905 aaPredicted RBP14.06□□□□□ -0.16
SSH2-208ENST00000579040 FOXP4Q8IVH2 680 aaPredicted RBP14.06□□□□□ -0.16
SSH2-208ENST00000579040 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 ZNF280CQ8ND82 737 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 TMEM106CQ9BVX2 250 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 GINM1Q9NU53 330 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 SRRDQ9UH36 339 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 NAV1Q8NEY1 1877 aa14.06□□□□□ -0.16
SSH2-208ENST00000579040 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
SSH2-208ENST00000579040 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
SSH2-208ENST00000579040 HLA-DOAP06340 250 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 ASNSP08243 561 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 CTGFP29279 349 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 FCGRTP55899 365 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 PDE3AQ14432 1141 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
SSH2-208ENST00000579040 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
SSH2-208ENST00000579040 TRIM34Q9BYJ4 488 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 AS3MTQ9HBK9 375 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.05□□□□□ -0.16
SSH2-208ENST00000579040 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
SSH2-208ENST00000579040 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
SSH2-208ENST00000579040 OSBPP22059 807 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 DYNLL1P63167 89 aaKnown RBP14.04□□□□□ -0.16
SSH2-208ENST00000579040 SPP2Q13103 211 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
SSH2-208ENST00000579040 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
SSH2-208ENST00000579040 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
SSH2-208ENST00000579040 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
SSH2-208ENST00000579040 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 PALD1Q9ULE6 856 aa14.04□□□□□ -0.16
SSH2-208ENST00000579040 RRP1BQ14684 758 aaKnown RBP14.03□□□□□ -0.16
SSH2-208ENST00000579040 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
SSH2-208ENST00000579040 RAET1EQ8TD07 263 aa14.03□□□□□ -0.16
SSH2-208ENST00000579040 NDUFB9Q9Y6M9 179 aa14.03□□□□□ -0.16
SSH2-208ENST00000579040 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
SSH2-208ENST00000579040 MYH8P13535 1937 aa14.02□□□□□ -0.16
SSH2-208ENST00000579040 APBB1O00213 710 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 USP5P45974 858 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 HMGCS2P54868 508 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 FAM110CQ1W6H9 321 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 TREML2Q5T2D2 321 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 SH3TC2Q8TF17 1288 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 EHD4Q9H223 541 aa14.02□□□□□ -0.17
SSH2-208ENST00000579040 SAP30BPQ9UHR5 308 aaKnown RBP14.02□□□□□ -0.17
SSH2-208ENST00000579040 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
SSH2-208ENST00000579040 EN2P19622 333 aaPredicted RBP14.01□□□□□ -0.17
SSH2-208ENST00000579040 GRK4P32298 578 aa14.01□□□□□ -0.17
SSH2-208ENST00000579040 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
SSH2-208ENST00000579040 BACE1P56817 501 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms