RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 FAM163AQ96GL9 167 aaPredicted RBP23.68■■□□□ 1.38
SMG8-203ENST00000578922 MTMR6Q9Y217 621 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 RHBDL3P58872 404 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 MICU3Q86XE3 530 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 TMEM63CQ9P1W3 806 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 SCN9AQ15858 1988 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SBK1Q52WX2 424 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 KIAA0825Q8IV33 1275 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 FAM184AQ8NB25 1140 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SUPT20HQ8NEM7 779 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SYAP1Q96A49 352 aaPredicted RBP23.67■■□□□ 1.38
SMG8-203ENST00000578922 UBAC1Q9BSL1 405 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SUGT1Q9Y2Z0 365 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SART3Q15020 963 aaKnown RBP23.67■■□□□ 1.38
SMG8-203ENST00000578922 APOA5Q6Q788 366 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 SMARCC2Q8TAQ2 1214 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 DYNLL2Q96FJ2 89 aa23.67■■□□□ 1.38
SMG8-203ENST00000578922 LLPHQ9BRT6 129 aaKnown RBP23.67■■□□□ 1.38
SMG8-203ENST00000578922 ERICH2A1L162 156 aa23.66■■□□□ 1.38
SMG8-203ENST00000578922 WTAPQ15007 396 aa23.66■■□□□ 1.38
SMG8-203ENST00000578922 CDC37L1Q7L3B6 337 aa23.66■■□□□ 1.38
SMG8-203ENST00000578922 ZNF277Q9NRM2 450 aaPredicted RBP23.66■■□□□ 1.38
SMG8-203ENST00000578922 CCDC69A6NI79 296 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 F13A1P00488 732 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 POLR3DP05423 398 aaPredicted RBP23.65■■□□□ 1.38
SMG8-203ENST00000578922 SLC3A2P08195 630 aaKnown RBP23.65■■□□□ 1.38
SMG8-203ENST00000578922 FAM47AQ5JRC9 791 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 DACT2Q5SW24 774 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 C12orf60Q5U649 245 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 STRIP1Q5VSL9 837 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 PIM2Q9P1W9 311 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 PLCG2P16885 1265 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 PDCP20941 246 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 METAP2P50579 478 aaKnown RBP eCLIP23.65■■□□□ 1.38
SMG8-203ENST00000578922 FERMT3Q86UX7 667 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 RBM27Q9P2N5 1060 aaKnown RBP23.65■■□□□ 1.38
SMG8-203ENST00000578922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.65■■□□□ 1.38
SMG8-203ENST00000578922 SLC12A7Q9Y666 1083 aa23.65■■□□□ 1.38
SMG8-203ENST00000578922 LAMB1P07942 1786 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 USP17L3A6NCW0 530 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 USP17L4A6NCW7 530 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 ZBTB43O43298 467 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 LIFRP42702 1097 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 PLCD1P51178 756 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 PICALMQ13492 652 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 USP17L1Q7RTZ2 530 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 TNKSO95271 1327 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 FLT1P17948 1338 aa23.64■■□□□ 1.38
SMG8-203ENST00000578922 ADAMTSL1Q8N6G6 1762 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 KIF13BQ9NQT8 1826 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 YDJCA8MPS7 323 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 CPLX1O14810 134 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 ADD1P35611 737 aaKnown RBP23.64■■□□□ 1.37
SMG8-203ENST00000578922 TGFB2P61812 414 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 SGMS1Q86VZ5 419 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 AMOTL1Q8IY63 956 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 PCDHAC2Q9Y5I4 1007 aa23.64■■□□□ 1.37
SMG8-203ENST00000578922 NAV1Q8NEY1 1877 aa23.63■■□□□ 1.37
SMG8-203ENST00000578922 FGRP09769 529 aa23.63■■□□□ 1.37
SMG8-203ENST00000578922 MSNP26038 577 aaKnown RBP23.63■■□□□ 1.37
SMG8-203ENST00000578922 PDE4BQ07343 736 aa23.63■■□□□ 1.37
SMG8-203ENST00000578922 CERS3Q8IU89 383 aa23.63■■□□□ 1.37
SMG8-203ENST00000578922 TEKT1Q969V4 418 aa23.63■■□□□ 1.37
SMG8-203ENST00000578922 SLC44A5Q8NCS7 719 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 GOLGA8AA7E2F4 631 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 DHX16O60231 1041 aaKnown RBP23.62■■□□□ 1.37
SMG8-203ENST00000578922 NMT2O60551 498 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 CDC27P30260 824 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 HMGN5P82970 282 aaKnown RBP23.62■■□□□ 1.37
SMG8-203ENST00000578922 LARGE2Q8N3Y3 721 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 CDK5RAP2Q96SN8 1893 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 ZSCAN10Q96SZ4 725 aaPredicted RBP23.62■■□□□ 1.37
SMG8-203ENST00000578922 USP40Q9NVE5 1235 aa23.62■■□□□ 1.37
SMG8-203ENST00000578922 ORC4O43929 436 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 PCP11498 1178 aaKnown RBP23.61■■□□□ 1.37
SMG8-203ENST00000578922 CRKP46108 304 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 RBM5P52756 815 aaKnown RBP eCLIP23.61■■□□□ 1.37
SMG8-203ENST00000578922 GDPD2Q9HCC8 539 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 TAOK2Q9UL54 1235 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 SYCE3A1L190 88 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 H3BQV1 296 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 FDPSP14324 419 aaKnown RBP23.61■■□□□ 1.37
SMG8-203ENST00000578922 DALRD3Q5D0E6 543 aaKnown RBP23.61■■□□□ 1.37
SMG8-203ENST00000578922 IFFO2Q5TF58 517 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 SYNE3Q6ZMZ3 975 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 ENAHQ8N8S7 591 aaPredicted RBP23.61■■□□□ 1.37
SMG8-203ENST00000578922 PSMD1Q99460 953 aa23.61■■□□□ 1.37
SMG8-203ENST00000578922 TSPY2A6NKD2 308 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 SEC23AQ15436 765 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 IQCA1Q86XH1 822 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 TMEM87AQ8NBN3 555 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 NUP133Q8WUM0 1156 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 MKNK2Q9HBH9 465 aa23.6■■□□□ 1.37
SMG8-203ENST00000578922 GRIPAP1Q4V328 841 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 APOBEC3HQ6NTF7 200 aaKnown RBP23.59■■□□□ 1.37
SMG8-203ENST00000578922 HHIPL2Q6UWX4 724 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 CHMP4CQ96CF2 233 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 NOL7Q9UMY1 257 aaKnown RBP23.59■■□□□ 1.37
SMG8-203ENST00000578922 RAD17O75943 681 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms