RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 COA7Q96BR5 231 aa9.78□□□□□ -0.84
CCDC58P1-201ENST00000578567 WRNIP1Q96S55 665 aa9.78□□□□□ -0.84
CCDC58P1-201ENST00000578567 POLR3GLQ9BT43 218 aa9.78□□□□□ -0.84
CCDC58P1-201ENST00000578567 RSPH6AQ9H0K4 717 aa9.78□□□□□ -0.84
CCDC58P1-201ENST00000578567 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
CCDC58P1-201ENST00000578567 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 F8W031 263 aaPredicted RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 KRT37O76014 449 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 KLRK1P26718 216 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 CCT4P50991 539 aaKnown RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 AAK1Q2M2I8 961 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 TIFAQ96CG3 184 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 SENP6Q9GZR1 1112 aaPredicted RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 TDRD3Q9H7E2 651 aaKnown RBP9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 GJD2Q9UKL4 321 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 MINPP1Q9UNW1 487 aa9.77□□□□□ -0.85
CCDC58P1-201ENST00000578567 XIRP2A4UGR9 3374 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 TLL1O43897 1013 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 EPHB4P54760 987 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 ANKRD18AQ8IVF6 992 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 PNISRQ8TF01 805 aaKnown RBP9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 TRIB2Q92519 343 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 REV3LO60673 3130 aa9.76□□□□□ -0.85
CCDC58P1-201ENST00000578567 TCP10L2B9ZVM9 353 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 RTP1P59025 263 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 CD209Q9NNX6 404 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 CD320Q9NPF0 282 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 PLXNB2O15031 1838 aa9.75□□□□□ -0.85
CCDC58P1-201ENST00000578567 ERC2O15083 957 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 EIF2S2P20042 333 aaKnown RBP9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 IGFBP4P22692 258 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 INPP5BP32019 993 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 RBM5P52756 815 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 PRSS12P56730 875 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 FKBP1AP62942 108 aaKnown RBP9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 CCDC85AQ96PX6 553 aaPredicted RBP9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 LEMD3Q9Y2U8 911 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
CCDC58P1-201ENST00000578567 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 CFAP54Q96N23 3096 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 TRIM43BA6NCK2 446 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 TRIM43Q96BQ3 446 aaPredicted RBP9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 BSDC1Q9NW68 430 aaPredicted RBP9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 TSR3Q9UJK0 312 aaKnown RBP9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
CCDC58P1-201ENST00000578567 FRMPD3Q5JV73 1810 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 CXCL11O14625 94 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 ITGB8P26012 769 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 CCND3P30281 292 aaPredicted RBP9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 TNNI2P48788 182 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 CACNB2Q08289 660 aaPredicted RBP9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 TRIM28Q13263 835 aaKnown RBP9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 ANKRD13CQ8N6S4 541 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 UIMC1Q96RL1 719 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 PDLIM7Q9NR12 457 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 ATP11BQ9Y2G3 1177 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 SLC45A1Q9Y2W3 748 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 KNSTRNQ9Y448 316 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 CHD9Q3L8U1 2897 aa9.72□□□□□ -0.85
CCDC58P1-201ENST00000578567 DZIP1LQ8IYY4 767 aaKnown RBP9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 COL26A1Q96A83 441 aa9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 ZNF112Q9UJU3 913 aa9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 RLFQ13129 1914 aa9.71□□□□□ -0.86
CCDC58P1-201ENST00000578567 A0A0G2JLL6 359 aaPredicted RBP9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 PDE8AO60658 829 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 FAM110CQ1W6H9 321 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 SLC39A5Q6ZMH5 540 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 ERMP1Q7Z2K6 904 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 PRRT2Q7Z6L0 340 aaPredicted RBP9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 DAGLAQ9Y4D2 1042 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 CACNA1GO43497 2377 aa9.7□□□□□ -0.86
CCDC58P1-201ENST00000578567 GRXCR1A8MXD5 290 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 IL1R1P14778 569 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 CYP2B6P20813 491 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 CACNA1BQ00975 2339 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 KCNC4Q03721 635 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 FASTKD5Q7L8L6 764 aaKnown RBP9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 SMCR8Q8TEV9 937 aaPredicted RBP9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 HERVK_113Q902F9 699 aa9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 RPAP1Q9BWH6 1393 aaPredicted RBP9.69□□□□□ -0.86
CCDC58P1-201ENST00000578567 ZNF341Q9BYN7 854 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms