RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 TFCP2Q12800 502 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 MEIS3Q99687 375 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 TBC1D12O60347 775 aa16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 RRP1BQ14684 758 aaKnown RBP16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 PROCA1Q8NCQ7 364 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 LAMA3Q16787 3333 aa16.84■□□□□ 0.29
UPF3AP2-202ENST00000578315 HMGCRP04035 888 aa16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 SYN1P17600 705 aa16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 PDS5AQ29RF7 1337 aaKnown RBP16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 ASCC2Q9H1I8 757 aaPredicted RBP16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 COL6A3P12111 3177 aa16.83■□□□□ 0.28
UPF3AP2-202ENST00000578315 ZNF316A6NFI3 1004 aaPredicted RBP16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 PEX10O60683 326 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 CAPN2P17655 700 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 CAP2P40123 477 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 GCLCP48506 637 aaPredicted RBP16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 MVPQ14764 893 aaKnown RBP16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 GDF15Q99988 308 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 HMX1Q9NP08 348 aaPredicted RBP16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 HMG20BQ9P0W2 317 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 GJD2Q9UKL4 321 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 AKAP2Q9Y2D5 859 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
UPF3AP2-202ENST00000578315 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 ZBTB22O15209 634 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 CYP2B6P20813 491 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 PABPC4Q13310 644 aaKnown RBP eCLIP16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 GORABQ5T7V8 394 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 SPATA5Q8NB90 893 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
UPF3AP2-202ENST00000578315 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 LDHCP07864 332 aa16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 GSTO1P78417 241 aa16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 ANKLE1Q8NAG6 615 aa16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 TRIB2Q92519 343 aa16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 API5Q9BZZ5 524 aaKnown RBP16.8■□□□□ 0.28
UPF3AP2-202ENST00000578315 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 MTMR2Q13614 643 aa16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 Q7L0L9 218 aa16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 SH3RF3Q8TEJ3 882 aaPredicted RBP16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 P2RX7Q99572 595 aaKnown RBP16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 C11orf49Q9H6J7 331 aa16.79■□□□□ 0.28
UPF3AP2-202ENST00000578315 PLXNB2O15031 1838 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 BMP8BP34820 402 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 MAGEA10P43363 369 aaPredicted RBP16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 DEFB123Q8N688 67 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
UPF3AP2-202ENST00000578315 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 JAG1P78504 1218 aa16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 TXNRD2Q9NNW7 524 aa16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 COL2A1P02458 1487 aaPredicted RBP16.77■□□□□ 0.28
UPF3AP2-202ENST00000578315 MAP4K4O95819 1239 aaPredicted RBP16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 MCAMP43121 646 aa16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 BACE1P56817 501 aa16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 TRMT2AQ8IZ69 625 aaKnown RBP16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 AATFQ9NY61 560 aaKnown RBP eCLIP16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 PI4KBQ9UBF8 816 aa16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
UPF3AP2-202ENST00000578315 GDF11O95390 407 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 GNAI3P08754 354 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 HERVK_113P62684 666 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 NUDT12Q9BQG2 462 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 UBE2OQ9C0C9 1292 aaKnown RBP16.75■□□□□ 0.27
UPF3AP2-202ENST00000578315 PFASO15067 1338 aa16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 Q3C1V9 767 aa16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 TDHQ8IZJ6 230 aa16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 TGFBRAP1Q8WUH2 860 aa16.74■□□□□ 0.27
UPF3AP2-202ENST00000578315 PAGR1Q9BTK6 254 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms