RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 PANK1Q8TE04 598 aa18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 ZNF512BQ96KM6 892 aaPredicted RBP18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 DBNLQ9UJU6 430 aaKnown RBP18.29■□□□□ 0.52
RN7SL560P-201ENST00000577943 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 FMNL1O95466 1100 aaPredicted RBP18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 MYCP01106 439 aaPredicted RBP18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 EN2P19622 333 aaPredicted RBP18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 TLR7Q9NYK1 1049 aaKnown RBP18.28■□□□□ 0.52
RN7SL560P-201ENST00000577943 CTGFP29279 349 aa18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 TGFBRAP1Q8WUH2 860 aa18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 TRIM47Q96LD4 638 aa18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
RN7SL560P-201ENST00000577943 BCRP11274 1271 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 MS4A1P11836 297 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 OSBPP22059 807 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 RAET1EQ8TD07 263 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 DHX36Q9H2U1 1008 aaKnown RBP18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 PIH1D3Q9NQM4 214 aaKnown RBP18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 PI4KBQ9UBF8 816 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 HERC5Q9UII4 1024 aaKnown RBP18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 SLC45A1Q9Y2W3 748 aa18.26■□□□□ 0.51
RN7SL560P-201ENST00000577943 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 IGSF3O75054 1194 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 CAP2P40123 477 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 PPP4CP60510 307 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 MAPKAPK5Q8IW41 473 aa18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 SMCR8Q8TEV9 937 aaPredicted RBP18.25■□□□□ 0.51
RN7SL560P-201ENST00000577943 MYPNQ86TC9 1320 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 FCGRTP55899 365 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 SPP2Q13103 211 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 AACSQ86V21 672 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 TBC1D2Q9BYX2 928 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
RN7SL560P-201ENST00000577943 FLT1P17948 1338 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 SLC34A2O95436 690 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 CYP7A1P22680 504 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 GRK4P32298 578 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 ZNF280CQ8ND82 737 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
RN7SL560P-201ENST00000577943 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 CRACR2BQ8N4Y2 399 aaPredicted RBP18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 AS3MTQ9HBK9 375 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
RN7SL560P-201ENST00000577943 HMGCS2P54868 508 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 PRKCZQ05513 592 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 FOXP4Q8IVH2 680 aaPredicted RBP18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 MAGEB6Q8N7X4 407 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 BIN2Q9UBW5 565 aaPredicted RBP18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 DDX19BQ9UMR2 479 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
RN7SL560P-201ENST00000577943 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 ASNSP08243 561 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 MTFR1Q15390 333 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 ANKRD13CQ8N6S4 541 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 MIGA1Q8NAN2 632 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 GABRQQ9UN88 632 aa18.2■□□□□ 0.5
RN7SL560P-201ENST00000577943 APBB1O00213 710 aa18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 TNPO2O14787 897 aaKnown RBP18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 HMMRO75330 724 aa18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 USP5P45974 858 aa18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 CERS3Q8IU89 383 aa18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 CLASRPQ8N2M8 674 aaKnown RBP18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 DNAJC18Q9H819 358 aa18.19■□□□□ 0.5
RN7SL560P-201ENST00000577943 UBXN2AP68543 259 aa18.18■□□□□ 0.5
RN7SL560P-201ENST00000577943 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
RN7SL560P-201ENST00000577943 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
RN7SL560P-201ENST00000577943 KIF1BPQ96EK5 621 aa18.18■□□□□ 0.5
RN7SL560P-201ENST00000577943 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
RN7SL560P-201ENST00000577943 GDF11O95390 407 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 FLT3LGP49771 235 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 MTMR2Q13614 643 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 TTF1Q15361 905 aaPredicted RBP18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 FAM110CQ1W6H9 321 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 SLAIN1Q8ND83 568 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 WDR18Q9BV38 432 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms