RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 A0A0G2JLL6 359 aaPredicted RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 CAP1Q01518 475 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 PRRT2Q7Z6L0 340 aaPredicted RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 METTL16Q86W50 562 aaKnown RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 CLASRPQ8N2M8 674 aaKnown RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 CD99L2Q8TCZ2 262 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 AATFQ9NY61 560 aaKnown RBP eCLIP12.87□□□□□ -0.35
LITAF-216ENST00000574848 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
LITAF-216ENST00000574848 AFG3L2Q9Y4W6 797 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 ZSWIM8A7E2V4 1837 aa12.87□□□□□ -0.35
LITAF-216ENST00000574848 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
LITAF-216ENST00000574848 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
LITAF-216ENST00000574848 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
LITAF-216ENST00000574848 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
LITAF-216ENST00000574848 NAV1Q8NEY1 1877 aa12.86□□□□□ -0.35
LITAF-216ENST00000574848 MYH1P12882 1939 aa12.86□□□□□ -0.35
LITAF-216ENST00000574848 PDHXO00330 501 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
LITAF-216ENST00000574848 MAP3K12Q12852 859 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
LITAF-216ENST00000574848 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 EFCC1Q9HA90 598 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.353e-7■■■□□ 18
LITAF-216ENST00000574848 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
LITAF-216ENST00000574848 MYH7P12883 1935 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 CYP7A1P22680 504 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 CAP2P40123 477 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
LITAF-216ENST00000574848 MLLT1Q03111 559 aaPredicted RBP12.84□□□□□ -0.35
LITAF-216ENST00000574848 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
LITAF-216ENST00000574848 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 TGFBRAP1Q8WUH2 860 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 PARK7Q99497 189 aaKnown RBP12.84□□□□□ -0.35
LITAF-216ENST00000574848 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
LITAF-216ENST00000574848 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
LITAF-216ENST00000574848 GNRH1P01148 92 aa12.83□□□□□ -0.36
LITAF-216ENST00000574848 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
LITAF-216ENST00000574848 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
LITAF-216ENST00000574848 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
LITAF-216ENST00000574848 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
LITAF-216ENST00000574848 MAPKAPK5Q8IW41 473 aa12.83□□□□□ -0.36
LITAF-216ENST00000574848 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
LITAF-216ENST00000574848 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
LITAF-216ENST00000574848 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
LITAF-216ENST00000574848 MGAMO43451 1857 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 BCRP11274 1271 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 ATP5JP18859 108 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 SOX10P56693 466 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
LITAF-216ENST00000574848 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
LITAF-216ENST00000574848 LRRCC1Q9C099 1032 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 EHD4Q9H223 541 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
LITAF-216ENST00000574848 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
LITAF-216ENST00000574848 TCRBV5S4A2TA0A5A2 114 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 APBB1O00213 710 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 HLA-DOAP06340 250 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 PDE6AP16499 860 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 PRMT2P55345 433 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 SH3D19Q5HYK7 790 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 ZNF280CQ8ND82 737 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 WDR18Q9BV38 432 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 CENPFP49454 3210 aa12.81□□□□□ -0.36
LITAF-216ENST00000574848 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 GOLIM4O00461 696 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 IGHDP01880 384 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 ASNSP08243 561 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 KIF22Q14807 665 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
LITAF-216ENST00000574848 HAUS7Q99871 368 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 DCTPP1Q9H773 170 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 AS3MTQ9HBK9 375 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 PAG1Q9NWQ8 432 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
LITAF-216ENST00000574848 CYP2C8P10632 490 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 CTGFP29279 349 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 TATDN1Q6P1N9 297 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 CRACR2BQ8N4Y2 399 aaPredicted RBP12.79□□□□□ -0.36
LITAF-216ENST00000574848 ZNF333Q96JL9 665 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
LITAF-216ENST00000574848 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
LITAF-216ENST00000574848 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms