RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 HSPA8P11142 646 aaKnown RBP11.81□□□□□ -0.52
NDE1-210ENST00000574163 TM4SF4P48230 202 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 PDE1AP54750 535 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
NDE1-210ENST00000574163 NUCB1Q02818 461 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 PPIL2Q13356 520 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
NDE1-210ENST00000574163 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 OPTNQ96CV9 577 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 PRDM10Q9NQV6 1147 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 PI4KBQ9UBF8 816 aa11.81□□□□□ -0.52
NDE1-210ENST00000574163 MYH8P13535 1937 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
NDE1-210ENST00000574163 CTNND1O60716 968 aaKnown RBP11.8□□□□□ -0.52
NDE1-210ENST00000574163 IGHDP01880 384 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 INPP5BP32019 993 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 GJA5P36382 358 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 USP5P45974 858 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 MIGA2Q7L4E1 593 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 EHD4Q9H223 541 aa11.8□□□□□ -0.52
NDE1-210ENST00000574163 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
NDE1-210ENST00000574163 MBD4O95243 580 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 GTF2A2P52657 109 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
NDE1-210ENST00000574163 PPATQ06203 517 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
NDE1-210ENST00000574163 LCORLQ8N3X6 602 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 APPBP2Q92624 585 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
NDE1-210ENST00000574163 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 OSBPL3Q9H4L5 887 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.79□□□□□ -0.52
NDE1-210ENST00000574163 ZCCHC17Q9NP64 241 aaKnown RBP11.79□□□□□ -0.52
NDE1-210ENST00000574163 PICK1Q9NRD5 415 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
NDE1-210ENST00000574163 RNF113AO15541 343 aaKnown RBP11.78□□□□□ -0.52
NDE1-210ENST00000574163 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
NDE1-210ENST00000574163 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
NDE1-210ENST00000574163 MS4A4AQ96JQ5 239 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 RNF186Q9NXI6 227 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
NDE1-210ENST00000574163 CETPP11597 493 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
NDE1-210ENST00000574163 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 TRIM34Q9BYJ4 488 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
NDE1-210ENST00000574163 SAP30BPQ9UHR5 308 aaKnown RBP11.77□□□□□ -0.53
NDE1-210ENST00000574163 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
NDE1-210ENST00000574163 CASP8AP2Q9UKL3 1982 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
NDE1-210ENST00000574163 CXCL11O14625 94 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 IRF6O14896 467 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 ASNSP08243 561 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 PTPRAP18433 802 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 GNAT2P19087 354 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 CAP2P40123 477 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 LBX1P52954 281 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 BRI3BPQ8WY22 251 aa11.76□□□□□ -0.53
NDE1-210ENST00000574163 CCL15-CCL14A0A0B4J2E2 113 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 FAM196BA6NMK8 535 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 TRPA1O75762 1119 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 GABPAQ06546 454 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 CCL15Q16663 113 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 PLEKHM2Q8IWE5 1019 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
NDE1-210ENST00000574163 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
NDE1-210ENST00000574163 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 ARPP21Q9UBL0 812 aaPredicted RBP11.75□□□□□ -0.53
NDE1-210ENST00000574163 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
NDE1-210ENST00000574163 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
NDE1-210ENST00000574163 GPAA1O43292 621 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 CHGBP05060 677 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms