RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 DNAJC2Q99543 621 aaKnown RBP15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 SAP30BPQ9UHR5 308 aaKnown RBP15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 USP5P45974 858 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 RGS19P49795 217 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 KIF22Q14807 665 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 TTF1Q15361 905 aaPredicted RBP15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 CRACR2BQ8N4Y2 399 aaPredicted RBP15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 PI4KBQ9UBF8 816 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 CPA4Q9UI42 421 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 PALD1Q9ULE6 856 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 PTPN22Q9Y2R2 807 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 AFG3L2Q9Y4W6 797 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 DOCK1Q14185 1865 aa15.45■□□□□ 0.06
NPLOC4-213ENST00000573519 MYO5AQ9Y4I1 1855 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 A0A0G2JLL6 359 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 GOLIM4O00461 696 aa15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 CAP1Q01518 475 aa15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 MOGSQ13724 837 aa15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 FASTKD5Q7L8L6 764 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 PRRT2Q7Z6L0 340 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 HERC5Q9UII4 1024 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-213ENST00000573519 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
NPLOC4-213ENST00000573519 CYP2C8P10632 490 aa15.43■□□□□ 0.06
NPLOC4-213ENST00000573519 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
NPLOC4-213ENST00000573519 LRRCC1Q9C099 1032 aa15.43■□□□□ 0.06
NPLOC4-213ENST00000573519 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
NPLOC4-213ENST00000573519 SMARCA5O60264 1052 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 CAP2P40123 477 aa15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 RRP1P56182 461 aaKnown RBP15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 LACTBP83111 547 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 SLC9C2Q5TAH2 1124 aa15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 GPAT2Q6NUI2 795 aa15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 BOLA2Q9H3K6 86 aa15.42■□□□□ 0.06
NPLOC4-213ENST00000573519 MAGEB6P1A0A0J9YX57 407 aa15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 SPP2Q13103 211 aa15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 ZNF280CQ8ND82 737 aa15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 AS3MTQ9HBK9 375 aa15.41■□□□□ 0.06
NPLOC4-213ENST00000573519 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 GDF11O95390 407 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 PDE6AP16499 860 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 SMCR8Q8TEV9 937 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 DNAJC18Q9H819 358 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 PAG1Q9NWQ8 432 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 PTCH2Q9Y6C5 1203 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 ADGRA2Q96PE1 1338 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 ZNF532Q9HCE3 1301 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
NPLOC4-213ENST00000573519 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 SIPA1L1O43166 1804 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 ATP5JP18859 108 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 PSMC4P43686 418 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 HMGCS2P54868 508 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
NPLOC4-213ENST00000573519 PHIPQ8WWQ0 1821 aa15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 ATAD5Q96QE3 1844 aa15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 ASNSP08243 561 aa15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.053e-8■■□□□ 12.8
NPLOC4-213ENST00000573519 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
NPLOC4-213ENST00000573519 MYCP01106 439 aaPredicted RBP15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 GNRH1P01148 92 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 CTGFP29279 349 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 JAG1P78504 1218 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 MTMR2Q13614 643 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 METTL16Q86W50 562 aaKnown RBP15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 PROCA1Q8NCQ7 364 aaPredicted RBP15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 TRIM47Q96LD4 638 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 HAUS7Q99871 368 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 SERPINB13Q9UIV8 391 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
NPLOC4-213ENST00000573519 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 BCRP11274 1271 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 HOXD10P28358 340 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 FCGRTP55899 365 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 LCORLQ8N3X6 602 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 SDR42E1Q8WUS8 393 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 ARMC5Q96C12 935 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms